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S15_scaffold_427_curated_3

Organism: S15_RifCSP_Pseudomonas_62_25_curated

near complete RP 51 / 55 MC: 3 BSCG 51 / 51 MC: 2 ASCG 14 / 38 MC: 1
Location: comp(3199..4383)

Top 3 Functional Annotations

Value Algorithm Source
Type II secretion system protein L n=1 Tax=Pseudomonas protegens CHA0 RepID=R4RJP2_9PSED similarity UNIREF
DB: UNIREF100
  • Identity: 74.3
  • Coverage: 404.0
  • Bit_score: 565
  • Evalue 2.30e-158
  • rbh
General secretion protein L {ECO:0000313|EMBL:BAQ74992.1}; TaxID=1500686 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. Os17.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 77.5
  • Coverage: 395.0
  • Bit_score: 589
  • Evalue 3.50e-165
general secretion pathway protein L similarity KEGG
DB: KEGG
  • Identity: 74.3
  • Coverage: 404.0
  • Bit_score: 565
  • Evalue 6.50e-159
  • rbh

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Taxonomy

Pseudomonas sp. Os17 → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1185
ATGAGTCGCTTGCGCATCGCCTTGCCGCCCCTGGCCGAGTTGATTGCGGCTGAAGCGCCATTGGCCAGCCCGGTGGACTTCGCCCGGCTCGATCGCAGTGGGCGGGTCGGGGAGATCGGCCTCCGTCCCCTGGGGCAACTGACCCAGGGTGGCAAACCGGTGCCGGTGGAGTGCTTCCTGCATCCGTTGGACAGCCTGCTGACCCATATCGAGTTGCCTCAGTTGCCGGCGGCGCGGATCAAGGCCGCGGTGGACTGCGCCGCCCAGGCGCTGATCCTCGGCCCCAGTGAGCAGATGCACGTGGCCCATGGCGCCCGGGATGCCCAGGGGCAGGTGGCCCTGAGCTGGTTGCCCAAGACCGCACTGCAAGCCCTGGGGCGTCTGTTGGCACAGGCCGGCCTGAAGCTTCAGGGGCTGTACCCGGCGCCTTATGCCTTGCCGGTGCCGCCGCCGGGGCAAGCCAACCTGTGCCTGCTCGATGGCCAGCTGCTGCTGCGCCAGAGCAGCGGGCAGGGCAGCGTGCAGCCGCTGGTGGAAGAAACCCTGGAGCAGTTGCGGGCCTCGGGCTGCGAGGTGGGCTGGATCGGCGATGCCGCGCCGCCGGTCTGCCAACTGCTGCCGGGCGAGCAACGCTGGAGCGGCCCGCTGCCGGGATGGGGCTTGCACGCCGGCGCGCTGGCGGGGGGCGTGAAGGTCCAAGGCTGGGGCCGGGCCCTGGGGTGCTGCGCCCTGGCCGTGCTGGTCTGGGTCGTGGGGCTGAACCTGTATGCCGCCCGTGAGGCCGAGCAGGGCCAGCGGCTCAAGGCGCAGATGAGTCAGCGGGTCAAGCAGGTGTTCCCGCAGTTGCCGGTGGTGCTCAATCCCCTGCAACAGGCCCGCCAGCAACTGGCGGCGCAGCAGAGCGGGGCGGCTGACCCGACCCAGGTGTTCAGCCGTCTGTTGCAGCAGGCCGGCAGTGCCATGCCCTTTATGGTGGGCAGCGTGCAGAGCCTGAGTTTCGCCGAGGACCGCTTGCAGCTGGAGCTGCTGCCGGACACCCCGAAGAGCGCCGACAGCGCCTGGCAGGGCGCCTTGACCCAGGCCGGCTACAGCGTCCGGGCCGAGGGCAATGGCTGGAGCCTGAGCCCGGCCGCAGACGAGCCGGCCAACGTCGCCGACAATCCCCCGGGAGCTGAAGATGAATAA
PROTEIN sequence
Length: 395
MSRLRIALPPLAELIAAEAPLASPVDFARLDRSGRVGEIGLRPLGQLTQGGKPVPVECFLHPLDSLLTHIELPQLPAARIKAAVDCAAQALILGPSEQMHVAHGARDAQGQVALSWLPKTALQALGRLLAQAGLKLQGLYPAPYALPVPPPGQANLCLLDGQLLLRQSSGQGSVQPLVEETLEQLRASGCEVGWIGDAAPPVCQLLPGEQRWSGPLPGWGLHAGALAGGVKVQGWGRALGCCALAVLVWVVGLNLYAAREAEQGQRLKAQMSQRVKQVFPQLPVVLNPLQQARQQLAAQQSGAADPTQVFSRLLQQAGSAMPFMVGSVQSLSFAEDRLQLELLPDTPKSADSAWQGALTQAGYSVRAEGNGWSLSPAADEPANVADNPPGAEDE*