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S15_scaffold_427_curated_6

Organism: S15_RifCSP_Pseudomonas_62_25_curated

near complete RP 51 / 55 MC: 3 BSCG 51 / 51 MC: 2 ASCG 14 / 38 MC: 1
Location: 5967..6353

Top 3 Functional Annotations

Value Algorithm Source
General secretion pathway protein I n=1 Tax=Pseudomonas sp. CMAA1215 RepID=U6ZSS1_9PSED similarity UNIREF
DB: UNIREF100
  • Identity: 88.3
  • Coverage: 128.0
  • Bit_score: 210
  • Evalue 7.90e-52
Type II secretion pseudopilin HxcV {ECO:0000313|EMBL:BAQ74995.1}; TaxID=1500686 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. Os17.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.9
  • Coverage: 126.0
  • Bit_score: 210
  • Evalue 1.10e-51
gspI; general secretion protein I similarity KEGG
DB: KEGG
  • Identity: 84.4
  • Coverage: 128.0
  • Bit_score: 203
  • Evalue 2.10e-50

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Taxonomy

Pseudomonas sp. Os17 → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 387
ATGCGAGCCGTGTCCAAACAAGCTGGATTTACCCTGATCGAGGTGCTGGTGGCCCTGGCCATCATTGCCGTGGCGATGGCCGCGGCAGTGCGCGTGGCCGGGCTGATGACCCAGAGCAACGGCCTGCTGCGGGACAAGTCCCTGGCCTTGCTGGCGGCGCAGAGCCGGCTCGCCGAGTTGCGCCTGGAAGGTCGTTTGCCCAGCGGATTGAAGAGCGTCGATTGCGACCAGGGACGCCTGCAGCTGCGCTGCGAACAGGCGATTGGCGCCGCAGCCGCGCCCGGGCTGTTGCGGGTCAGCGTCCAGGTGCGCGACCGCAGCCGCGAGGCGCCGCCCCTGGCCCGCCTGGAAACCCTGGTCAGCCGGCCCCAGGTGCCGCGCCAGTGA
PROTEIN sequence
Length: 129
MRAVSKQAGFTLIEVLVALAIIAVAMAAAVRVAGLMTQSNGLLRDKSLALLAAQSRLAELRLEGRLPSGLKSVDCDQGRLQLRCEQAIGAAAAPGLLRVSVQVRDRSREAPPLARLETLVSRPQVPRQ*