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S15_scaffold_427_curated_7

Organism: S15_RifCSP_Pseudomonas_62_25_curated

near complete RP 51 / 55 MC: 3 BSCG 51 / 51 MC: 2 ASCG 14 / 38 MC: 1
Location: comp(6357..6797)

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein n=2 Tax=Pseudomonas protegens RepID=R4RJA4_9PSED similarity UNIREF
DB: UNIREF100
  • Identity: 91.1
  • Coverage: 146.0
  • Bit_score: 254
  • Evalue 5.40e-65
general secretion protein C similarity KEGG
DB: KEGG
  • Identity: 91.1
  • Coverage: 146.0
  • Bit_score: 254
  • Evalue 1.50e-65
Putative general secretion pathway protein C {ECO:0000313|EMBL:AAY92023.2}; TaxID=220664 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 90.8
  • Coverage: 142.0
  • Bit_score: 247
  • Evalue 9.30e-63

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Taxonomy

Pseudomonas protegens → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 441
ATGCTACGTGCCATGTCATTTCCGTCGCGCCTTGACGCCCCCCGGTTGCTGCAATACGCGGCGTTGCTGGCGGCCCTGGCCGGTGTTGCCACCTGGTCGTCGCTGCTGCTGACCCCGGCGCAATCCCAACCCACGGCAGTGGCGCCCCAGGTGCTCGCCGCGCGCTCCGACAACCCGGCCTTGCAGTGGTTTGCCAACCAGCCGGTGCAGGTGGATATCAAGGTGTCCGGGGTCATGGCCGGCGCCCGTGGTGCGGTGGCGATCCTGAGCCTGAACGACGGTCCGCCGCGCAGCTTTCTGGCCGGCGAGCAACTGACCCAGGGGGTGCGCCTGGCCGCCGTCGAGGCCGACGGCGTGCTGATCGAGCGCGGCGGCGAACAGTCGCGGATCAAGGTCAGCAAGCTGCCGGACTCGCCGCTGCTGCCACGGCTGACACGCTGA
PROTEIN sequence
Length: 147
MLRAMSFPSRLDAPRLLQYAALLAALAGVATWSSLLLTPAQSQPTAVAPQVLAARSDNPALQWFANQPVQVDIKVSGVMAGARGAVAILSLNDGPPRSFLAGEQLTQGVRLAAVEADGVLIERGGEQSRIKVSKLPDSPLLPRLTR*