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S15_scaffold_427_curated_12

Organism: S15_RifCSP_Pseudomonas_62_25_curated

near complete RP 51 / 55 MC: 3 BSCG 51 / 51 MC: 2 ASCG 14 / 38 MC: 1
Location: comp(9743..10489)

Top 3 Functional Annotations

Value Algorithm Source
Putative TonB-dependent siderophore receptor n=1 Tax=Pseudomonas protegens CHA0 RepID=R4RJA1_9PSED similarity UNIREF
DB: UNIREF100
  • Identity: 85.9
  • Coverage: 248.0
  • Bit_score: 413
  • Evalue 1.20e-112
  • rbh
putative TonB-dependent siderophore receptor similarity KEGG
DB: KEGG
  • Identity: 85.9
  • Coverage: 248.0
  • Bit_score: 413
  • Evalue 3.40e-113
  • rbh
Secretin and TonB N terminus short domain-containing protein {ECO:0000313|EMBL:BAQ75001.1}; TaxID=1500686 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. Os17.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 83.8
  • Coverage: 228.0
  • Bit_score: 362
  • Evalue 3.40e-97

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Taxonomy

Pseudomonas sp. Os17 → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 747
GTGCAGCGACGCAGCGCGCAGGTCGGGCGATGGACTTCATTGCACGGGGGCTTGGCGACCTGTGTGCTGGGGTTCGTGCTGCTGGCGTTGATGCCGCAGGGCTGGGGCCAGCCCGCTGTCGAGGGACCGCCCCGGGTGGATTCCCAGGCCTTGCTGACGCTGGAGATTCCGGCGCAGAACCTGGTGGATGCCCTGGAGTTGTTCAGTCGCGCCACAGGAATGGCGGTGCTGGTGGATCGGGAGTTGACCCGGGGGCGGCGGTCGGTGGGGATCAAGGGCCGCTACAGCGCTCAGGAGGGCTTGAGTCGCCTGCTGGCGGGCAGTGGCCTGATGGCCCGTTATGCCCGCAGCGATGCCTTCACCCTGCAGGTGCCGCAGGCCACGCCGGCCACGCCGCTACCGGGTGCGGGAAGCAGCCGGGCGGCGCGGCTCAACAGCAGTTATGCCAGTGCCGTGCAACAGGCGGTGGAGCACAGTCTGTGTGGTTCGGCGCTGACCCGTCCGGGCCGCTTTCGCGCTTTGTTGCAACTGTGGATCGGCGCCGATGGCCGGGTGCAGCACAGCCGCCTGGTGAGCTCCACCGGCGATCTGCAGCGCGATGAAGCCTTGGTGCAGCGCCTGGCGGACACCCGGGTTCAGCGCCAGGCGCCCAGCTCGCTGCGCCAGCCGCTGACCTTACTCTTGATACCGGACACAACAGGGAAACGCATGGACTGCAGGGAATGGGAAGGAGCTTCCGGGGTATGA
PROTEIN sequence
Length: 249
VQRRSAQVGRWTSLHGGLATCVLGFVLLALMPQGWGQPAVEGPPRVDSQALLTLEIPAQNLVDALELFSRATGMAVLVDRELTRGRRSVGIKGRYSAQEGLSRLLAGSGLMARYARSDAFTLQVPQATPATPLPGAGSSRAARLNSSYASAVQQAVEHSLCGSALTRPGRFRALLQLWIGADGRVQHSRLVSSTGDLQRDEALVQRLADTRVQRQAPSSLRQPLTLLLIPDTTGKRMDCREWEGASGV*