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S15_scaffold_427_curated_16

Organism: S15_RifCSP_Pseudomonas_62_25_curated

near complete RP 51 / 55 MC: 3 BSCG 51 / 51 MC: 2 ASCG 14 / 38 MC: 1
Location: comp(13676..18535)

Top 3 Functional Annotations

View all annotations
Value Algorithm Source
NAD-glutamate dehydrogenase {ECO:0000313|EMBL:AAY92014.2}; EC=1.4.1.2 {ECO:0000313|EMBL:AAY92014.2};; TaxID=220664 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.3
  • Coverage: 1619.0
  • Bit_score: 3164
  • Evalue 0.0
NAD-glutamate dehydrogenase n=1 Tax=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) RepID=Q4KD35_PSEF5 similarity UNIREF
DB: UNIREF100
  • Identity: 98.3
  • Coverage: 1619.0
  • Bit_score: 3164
  • Evalue 0.0
  • rbh
NAD-glutamate dehydrogenase similarity KEGG
DB: KEGG
  • Identity: 98.3
  • Coverage: 1619.0
  • Bit_score: 3164
  • Evalue 0.0

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Taxonomy

Pseudomonas protegens → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 4860
ATGGCGTTCTTCACCGCAGCCAGCAAGGCCGACTTCCAGCACCAACTGCAAGCGGCACTGGCCCAGCACATCAGTGAACAGGCACTGCCACAAGTGGCGCTGTTCGCTGAACAATTCTTCGGCATCATTTCCCTGGACGAACTCACCCAGCGTCGCATGTCCGACCTGGCGGGCTGCACCCTTTCTGCCTGGCGCCTGCTTGAGCGCTTCGATCACGCGCAACCGCAAGTGCGCGTCTACAACCCCGATTACGAACGTCATGGCTGGCAGTCGACCCACACCGCGGTGGAAGTCCTGCACCACGACCTGCCGTTTTTGGTGGACTCGGTCCGTACCGAGCTCAACCGTCGCGGCTACAGCATCCACACCCTGCAGACCACCGTGCTCAGCGTACGCCGCGGCAGCAAGGGCGAGCTGCAAGAAGTCCTGCCCAAGGGCACCCAGGGCGAGGGCGTGCAGCAAGAGTCGCTGATGTACCTGGAGATCGACCGCTGCGCCAACGCCGCCGAACTCAGCGTGCTGGGCAAGGAGCTGGAACAGGTACTGGGTGAAGTGCGCGTCGCCGTGGCCGACTTCGAGCCGATGAAGGCCAAGGTCCAGGAACTGATCGAAAGCATCGACAACAGCCAGTTCGCCATCGCTGCCGATGAAAAGACCGAGATCAAGAGCTTTCTGGAATGGCTGGTGGGCAACCACTTCACCTTCCTCGGCTATGAAGAATTCGTGGTCGGCACCGATCAGGATGGCGGGCATATCGACTATGACCCAAGCTCCTTCCTCGGCCTGGCCAAGCTGCTGCGCGCCGGCCTCACCAGCGATGACCTGCGCATCGAAGACTACGCCGTCAACTACCTGCGCGAACCGACGCCGCTGTCGTTCGCCAAGGCCGCGCACCCCAGCCGCGTGCACCGTCCGGCCTACCCGGACTTCGTCTCGATCCGCCAGATCGACGCCGACGGCAAGGTGATCAAGGAATGCCGCTTCATGGGCCTCTACACCTCCTCGGTGTACGGCGAAAGCGTGCGAGTGATTCCTTACATCCGCCGCAAGGTCGAAGTCATCGAGCAGCGCTCGGGCTTCCAGGCCAAGGCGCACCTGGGCAAGGAACTGGCCCAGGTCCTGGAAGTGCTGCCACGGGACGATCTGTTCCAGACCCCGGTGGACGAGCTGTTCAGCACCGTGATGTCCATCGTGCAGATCCAGGAACGCAACAAGATCCGCGTGTTCCTGCGCAAGGACCCTTACGGCCGTTTCGCCTACTGTCTGGCCTATGTGCCGCGCGACATCTATTCCACCGAAGTGCGGCAGAAGATCCAGCAAGTGCTGATGGATCGCCTGCAGGCCACTGACTGCGAGTTCTGGACCTTCTTCTCCGAGTCGGTGCTGGCCCGCGTGCAGCTGATCCTGCGAGTGGACCCGAAACAACGCATCGACATCGACCCGCTGCTGCTGGAAAAAGAAGTGGTGCAGGCCTGCCGCAGCTGGCAGGACGACTACGCCAGCCTGGTGGTGGAAAGCTTCGGCGAAGCCCACGGCACCAACGTGCTGGCGGACTTCCCCAAAGGCTTCCCGGCCGGCTACCGCGAGCGTTTCGCCGCGCACTCGGCGGTGGTGGACATGCAGCACCTGCTGAGCCTGACCGAAGCCAACCCGCTGGTGATGAGCTTCTACCAGCCCCTGGGCCAGGTGTCCGGCCAGCGCGAGCTGCATTGCAAGCTGTACCACGCCGACACCCCGCTGGCGCTGTCCGACGTGCTGCCGATCCTGGAAAACCTCGGCCTGCGCGTGCTGGGTGAGTTCCCGTACCGCCTGCGCCACAACAATGGCCGCGAGTACTGGATCCACGACTTCGCCTTCACCGCCGCCGAAGGCCTGGACCTGGACATCCAGCAGCTCAACGACACGCTGCAGGACGCCTTCGTCCACATCGTCCGTGGCGATGCCGAGAACGACGCCTTCAACCGCCTGGTGCTGACTGCCGGCCTGCCATGGCGCGACGTGGCGCTGCTGCGTGCCTACGCCCGCTACCTGAAGCAGATCCGCCTGGGCTTCGACCTGGGCTACATCGCCAGCACCCTGAACAACCACACCGACATCGCCCGCGAGTTGACCCGGCTGTTCAAGACCCGTTTCTACCTGGCGCGCAAGCTCACCAGTGAAGACCTGGAAGACAAGCAGCAGCGTCTGGAACAAGCGATCCTCACCGCCCTGGACGACGTTCAGGTGCTCAACGAAGACCGCATCCTGCGACGCTACCTGGACCTGATCAAGGCCACCCTGCGGACCAACTTCTACCAGACCGACGCCAACGGCCAGAACAAGTCCTACTTCAGCTTCAAGTTCAACCCGCACCTGATCCCCGAGCTGCCCAAGCCGGTGCCCAAGTTCGAAATCTTCGTCTACTCGCCACGGGTTGAAGGCGTGCATCTGCGCTTTGGCAACGTCGCTCGCGGCGGTCTGCGCTGGTCCGACCGTGAAGAAGACTTCCGTACCGAAGTCCTGGGCCTGGTAAAAGCCCAGCAAGTGAAGAACTCGGTGATCGTGCCGGTGGGCGCCAAGGGCGGCTTCCTGCCCCGTCGCCTGCCACTGGGCGGCAGCCGGGACGAGATCGCGGCCGAAGGCATCGCCTGCTACCGCATCTTCATTTCCGGCTTGCTGGACATCACCGACAACCTGAAAGACGGCGCCCTGGTGCCACCGGCCAACGTGGTGCGGCATGACGGCGACGACCCGTACCTGGTGGTGGCGGCGGACAAGGGCACTGCGACCTTCTCCGACATCGCCAACGGCATTGCCATCGACTACGGCTTCTGGCTGGGTGACGCCTTCGCCTCCGGCGGTTCCGCCGGTTACGACCACAAGAAGATGGGCATCACCGCCAAGGGCGCGTGGGTCGGCGTGCAGCGCCACTTCCGCGAGCGCGGCATCAATGTCCAGGAAGACAGCATCACCGTGGTCGGCATCGGCGACATGGCCGGCGACGTGTTCGGCAACGGCCTGTTGATGTCCGACAAGCTGCAACTGGTGGCGGCGTTCAACCACCTGCACATCTTCATCGACCCGAACCCGGACCCGGCCACCAGCTTCGTCGAGCGCAAGCGCATGTTCGAGCTGCCGCGTTCGGCCTGGACCGACTACGACACCAGCATCATGTCCGAAGGCGGCGGCATCTTCTCGCGCAGCGCGAAGAGCATCGCCATCTCGCCGCAGATGAAAGAACGCTTCGACATCCAGGCCGACAAGTTGACCCCGACCGAGCTGCTCAACGCCTTGCTCAAGGCGCCGGTGGACCTGTTGTGGAACGGCGGGATCGGCACCTACGTCAAGGCCAGCACCGAGAGCCACGCTGACGTCGGCGACAAGGCCAACGACGCCCTGCGCGTCAACGGCAACGAGCTGCGCTGCAAAGTGGTGGGCGAGGGCGGCAACCTGGGCATGACCCAGCTGGGTCGTGTGGAGTTCGGCCTCAATGGCGGCGGTTCCAACACCGACTTCATCGACAACGCCGGTGGCGTGGACTGCTCCGACCACGAAGTGAACATCAAGATCCTGCTCAACGAAGTGGTGCAGGCCGGCGACATGACTGACAAGCAGCGCAACCAGCTGCTGGCCAGCATGACCGACGAAGTCGGCGGCCTGGTGTTGGGCAACAACTACAAGCAGACCCAGGCCCTGTCCCTGGCCGCGCGCCGTGCCTACGAGCGTGCTGCCGAGTACAAGCGCTTGATGAGCGACCTGGAAGGCCGCGGCAAGCTGGATCGCGCCATCGAGTACCTGCCGACCGAGGAGCAGCTCACCGAGCGCGCCGCGACTGGCAAGGGCCTGACCCGTCCGGAGCTGTCGGTGCTGATTTCCTACAGCAAGATCGACCTCAAGGAAGCCTTGCTCAAGTCCCTGGTGCCGGATGACGACTACCTGACCCGTGACATGGAGACCGCGTTCCCGCCGAGCCTGGTGGCCAAGTTCTCCGAAGCCATGCGTCGCCATCGTCTGAAGCGCGAGATCGTCAGCACCCAGATCGCCAACGACCTGGTCAACCACATGGGCATCACCTTCGTGCAGCGCCTGAAGGAGTCCACCGGCATGAGCCCGGCGAACGTCGCCGGTGCCTACGTGATCGTGCGGGACATCTTCCACCTGCCGCACTGGTTCCGTCAGATCGAAGCCCTGGATCACCAGGTCTCGGCCCAGGTGCAACTGGAGCTGATGGATGAACTGATGCGTCTGGGCCGTCGGGCGACCCGCTGGTTCCTGCGCAGCCGGCGCAACGAGCAGGATGCCGCGCGCGATGTCGCGCACTTCGGTCCGCACCTGGCGGCGCTGGGCCTCAAGCTCGACGAACTGCTGGAAGGCCCGACCCGCGAAGGCTGGCAGAACCGTTACCAGGCCTATGTCGAAGCCGGCGTACCGGAGTTGCTGGCGCGCATGGTTGCAGGCACCACTCACCTGTACACCCTGCTGCCGATCATCGAGGCGGCCGACGTGACCGGTCAGAGCGCGGCCGATGTGGCCAAGGCCTACTTCGCCGTGGGCAGCGCCCTGGACCTGCCGTGGTACCTGCAGCAGATCAGCGATCTGCCGGTGGGCAACAACTGGCAGGCCCAGGCCCGTGAAGCCTTCCGCGATGACGTGGACTGGCAGCAACGGGCGATCACCATCAAGGTGCTGCAGATGGCCGATGCGCCGGACGACATGGAAGCCCGCGTGGCCCTGTGGCTGGAGCAGAACGCGAGCATGGCTGATCGCTGGCGCGCCATGATGGTGGAAATCCGTGCCGCCAGCGGCACCGACTACGCCATGTATGCCGTGGCCAACCGGGAACTGCTGGACCTGGCCATGAGCGGTCAGTCGGTGCTGTAA
PROTEIN sequence
Length: 1620
MAFFTAASKADFQHQLQAALAQHISEQALPQVALFAEQFFGIISLDELTQRRMSDLAGCTLSAWRLLERFDHAQPQVRVYNPDYERHGWQSTHTAVEVLHHDLPFLVDSVRTELNRRGYSIHTLQTTVLSVRRGSKGELQEVLPKGTQGEGVQQESLMYLEIDRCANAAELSVLGKELEQVLGEVRVAVADFEPMKAKVQELIESIDNSQFAIAADEKTEIKSFLEWLVGNHFTFLGYEEFVVGTDQDGGHIDYDPSSFLGLAKLLRAGLTSDDLRIEDYAVNYLREPTPLSFAKAAHPSRVHRPAYPDFVSIRQIDADGKVIKECRFMGLYTSSVYGESVRVIPYIRRKVEVIEQRSGFQAKAHLGKELAQVLEVLPRDDLFQTPVDELFSTVMSIVQIQERNKIRVFLRKDPYGRFAYCLAYVPRDIYSTEVRQKIQQVLMDRLQATDCEFWTFFSESVLARVQLILRVDPKQRIDIDPLLLEKEVVQACRSWQDDYASLVVESFGEAHGTNVLADFPKGFPAGYRERFAAHSAVVDMQHLLSLTEANPLVMSFYQPLGQVSGQRELHCKLYHADTPLALSDVLPILENLGLRVLGEFPYRLRHNNGREYWIHDFAFTAAEGLDLDIQQLNDTLQDAFVHIVRGDAENDAFNRLVLTAGLPWRDVALLRAYARYLKQIRLGFDLGYIASTLNNHTDIARELTRLFKTRFYLARKLTSEDLEDKQQRLEQAILTALDDVQVLNEDRILRRYLDLIKATLRTNFYQTDANGQNKSYFSFKFNPHLIPELPKPVPKFEIFVYSPRVEGVHLRFGNVARGGLRWSDREEDFRTEVLGLVKAQQVKNSVIVPVGAKGGFLPRRLPLGGSRDEIAAEGIACYRIFISGLLDITDNLKDGALVPPANVVRHDGDDPYLVVAADKGTATFSDIANGIAIDYGFWLGDAFASGGSAGYDHKKMGITAKGAWVGVQRHFRERGINVQEDSITVVGIGDMAGDVFGNGLLMSDKLQLVAAFNHLHIFIDPNPDPATSFVERKRMFELPRSAWTDYDTSIMSEGGGIFSRSAKSIAISPQMKERFDIQADKLTPTELLNALLKAPVDLLWNGGIGTYVKASTESHADVGDKANDALRVNGNELRCKVVGEGGNLGMTQLGRVEFGLNGGGSNTDFIDNAGGVDCSDHEVNIKILLNEVVQAGDMTDKQRNQLLASMTDEVGGLVLGNNYKQTQALSLAARRAYERAAEYKRLMSDLEGRGKLDRAIEYLPTEEQLTERAATGKGLTRPELSVLISYSKIDLKEALLKSLVPDDDYLTRDMETAFPPSLVAKFSEAMRRHRLKREIVSTQIANDLVNHMGITFVQRLKESTGMSPANVAGAYVIVRDIFHLPHWFRQIEALDHQVSAQVQLELMDELMRLGRRATRWFLRSRRNEQDAARDVAHFGPHLAALGLKLDELLEGPTREGWQNRYQAYVEAGVPELLARMVAGTTHLYTLLPIIEAADVTGQSAADVAKAYFAVGSALDLPWYLQQISDLPVGNNWQAQAREAFRDDVDWQQRAITIKVLQMADAPDDMEARVALWLEQNASMADRWRAMMVEIRAASGTDYAMYAVANRELLDLAMSGQSVL*