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S15_scaffold_2_curated_1

Organism: S15_RifCSP_Pseudomonas_62_25_curated

near complete RP 51 / 55 MC: 3 BSCG 51 / 51 MC: 2 ASCG 14 / 38 MC: 1
Location: 169..3621

Top 3 Functional Annotations

Value Algorithm Source
RecBCD enzyme subunit RecC {ECO:0000256|HAMAP-Rule:MF_01486}; EC=3.1.11.5 {ECO:0000256|HAMAP-Rule:MF_01486};; Exonuclease V subunit RecC {ECO:0000256|HAMAP-Rule:MF_01486}; Helicase/nuclease RecBCD subunit RecC {ECO:0000256|HAMAP-Rule:MF_01486}; TaxID=1500687 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. St29.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.4
  • Coverage: 1149.0
  • Bit_score: 2223
  • Evalue 0.0
recC; exodeoxyribonuclease V gamma chain RecC (EC:3.1.11.5) similarity KEGG
DB: KEGG
  • Identity: 95.1
  • Coverage: 1150.0
  • Bit_score: 2217
  • Evalue 0.0
  • rbh
exodeoxyribonuclease V subunit gamma n=1 Tax=Pseudomonas fluorescens RepID=UPI0002DA25E4 similarity UNIREF
DB: UNIREF100
  • Identity: 95.0
  • Coverage: 1150.0
  • Bit_score: 2218
  • Evalue 0.0
  • rbh

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Taxonomy

Pseudomonas sp. St29 → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 3453
ATGCCGGACGCCTCGTCCCTCACCCCAGGTTTTATGGTGGTTCACGGTAACCGCCTGGACGAGTTGCGCAGCCTGGTGGTCAGCTGGATGCGGCGCTACCCGCTGGCCCCTCTGGAAAATGAAATCGCCCTGGTGCAGAGCAATGGCATCGCGCAATGGCTGAAGTTGGCCCTGGCTGAAGATCCTGAAGAGGACGACTCCGGCGGTTGCGGCATTGCCGCCGCCATCGATGTGCAATTGCCTGGCAGCTTCATGTGGCAGCTTTATCGTCTGGTATTGGGACGCGATGAAATCCCGCCTAAATCCCTTTTGGACAAAGCCCCGCTGACCTGGCGTCTGATGCGCCTGCTGCCAGAACTGATCGATGAGCCCCACTTCGAACCCCTGCAGCGCTTCCTGACCCACGACAGTGATTTGCGTAAACGCTACCAACTGGCAGAGCGCCTTGCCGACCTGTTCGACCAGTATCAGGTCTATCGGGCCGATTGGCTGGAGGACTGGGCCGCTGGACGCCATTCACTGCGTAACGTTCGTGGCGAAGCCAAAGCCCTGACCCCGGCCAACTGCTGGCAAGCCGAACTGTGGCGAGCACTGCTTCTGGATGTGGGTACCGAGGGCATGGCCCAGAGCCGAGCCGGAGTCCACCAACGCTTTATCGAGCGGATCAATAACCTGGATCAAGCTCCCGCTGGCCTGCCGTCACGGGTGATCGTTTTCGGTATTTCTTCCTTGCCGGCCCAGGCCTTGGAGGCTTTGGCCGGATTGGCCCGTTTCAGCCAAGTCCTTCTCTGTGTGCACAACCCCTGTCGCCATCACTGGGCGGACATCGTTGCCGACAAGGATCTGCTGCGCCATCAGTACAAACGCCAGGCGCGCAAAGCCGGTATGCCACTGGCCCTGGACCCGCAAACCCTGCACCAGCATGCCCATCCGTTGCTGGCCGCCTGGGGCAAGCAGGGCCGTGACTACATCAACCTGCTGGACAGCTACGACGACCCCAACAGTTATCGCGCGGCTTTCCGCGATGGCCGCATCGACCTGTTCAGCGACAGCCAGCCACGCACCATGCTTCAGCAGCTGCAGGACGATATCCTCGAGCTGCGTCCCCTCAACGAGACTCGCGAACTGTGGCCCGAAGTCGATCTCCAGCAGGACCAGTCGATCCGTTTTCACATTGCCCATAGTGCCCAGCGCGAGGTGGAAATCCTCCACGACCAGCTCCTGGCACGCTTCAGCGCCGAGCCCGACCTGCGACCTCGCGATGTGATCGTCATGGTCCCCGACATCGACAGCTACGCCCCGCATATCCGTGCGGTATTCGGCCAGTTGGAGCGTGATGACCGACGTTTCATTCCCTTTACCCTCACCGACCAGGGACAGCGCGGTCGCGACCCGTTGCTGATCGCCGTCGAACACCTGCTCAAACTCCCCGACAGCCGCTTCCCGGTCAGTGAGATTCTCGACCTGCTGGACGTCCCGGCATTGCGTGCGCGTTTTGGTGTCGATGAAGCCGACCTGCCTACCTTGCACCGCTGGATCGAAGGTGCCGGCATCCGTTGGGGCATGAACGCCGAACAACGTGCCGAATTGGGACTGCCCCAGGAGCTTGAGCAAAACAGCTGGCGTTTCGGCCTGCGCCGAATGCTCCTGGGATACGCGGTCGGCCGCTCCGATGCCTGCGACGGCATTGAGCCTTATGACGAAATCGGCGGCCTGGATGCCGCGCTGATCGGCCCCTTGGTCGCACTGCTGGATGCCCTGCAGATTGCCTACCAGCAACTCACTCAGCCTGCTGTGCCAGCCCAATGGGGCGAGCGCCTGCAGCACTTGCTGGAACAGTTCTTCCTGGCTAGCACCGAGCATGACGATTACCTGTTGGGCCAGCTCGAGGACCTTCGGGAAAACTGGCTGGAAACCTGCGACTCCGTCGGTCTGCAAGATCAATTGCCCCTGACCGTGGTGCGTGAAGCCTGGCTGGCGGGCCTTGATCAGGGCCGCTTGTCCCAGCGCTTCCTCGCCGGCGCCGTGAATTTCTGCACCCTGATGCCGATGCGTGCAATCCCCTTCAAGCTGGTGTGCCTGCTGGGCATGAATGACGGTGACTACCCACGGGCGCAACCGCCCCTGGACTTCGACCTGATGGGCAGCGACTACCGCCCCGGCGACCGTTCCCGACGCGAAGATGACCGCTATCTGCTGCTCGAAGCGTTGCTCTCAGCCCGGGACCAACTCTATGTCAGTTGGGTTGGCCGCAGCATCCGCGATAACAGCGAACGGCCTGCCTCGGTGCTGATCGGCCAGTTGCGCGATCATCTGGCCGGTGGCTGGCGATTGGCCGATGCGCAGCAATCCCTGCTCGAGGCCCTGACCCAGGAGCACCCGCTGCAGCCCTTCAGTGCCCGCTATTTTCATGACAATGACGTCCTGTTTAGTTACGCCCGGGAGTGGCAGGTGCTGCATCAGGCCCCGGCAGAAACCGGCACCACCGAACGCCTCGAGCCTTATGTACAGGATGAGCCCTTGAGCCTGGCCCAGTTGCAGGATTTTCTACGCAACCCGGTACGGCACTTTTTCAGCCAACGGCTCAAGGTGTTTTTTGAAGCCATGGAAGCACCACTGGCTGACGAGGAGCCCTTTGTCCTCGACGCCCTGCAACGCTACAGCCTCAGCGACAGCTTGCTGGAGGCCGCATTGAGCGATGCCGCACACCCGGATCAGGCCTTGCAGGCCCAGGCGCAAAGGCTGCAAGCCAGCGGCCTGTTGCCCATGGCCGGTTTCGGCGAGTGCCTGCAGCGCGAACTCATGGAGCCCCTGCCGGACTTGTTGCAGCGCTACCGGCAACTGCTGGATCTGTGGCCAACCCCGGTCACCAGTGCATTGCCTGTCAGCCTGGAATTGCAGGGCGTGCGCCTGGAAGGCTGGTTGAGCCACCTGCATCAACGGGCGGATGGCGGGCTATTGGCCGTGACCACCATTCCCAACGGCATAGGTTCGCTCAAAACCCGTAAATGGCACCGCTTGATCAAGCCCTGGATCAACCATCTGCTGGCCTGCGCCAGCGGTTACTCACTGACCACCGCGTTGGTGGCCAGCGATGACAGCCTGCTGTTGCCGCCGTTGGAACAGGATCAGGCTCGGGCGATCCTCGGCAATCTGCTGCTGGCCTGGCAATCGGGCATGCGTCAGCCACTGCCGGTGGCCGTCAAGACTGCCTTCGCCTGGCTGGGCCAGACCGATCCTGACAAAGCCGCTGCCGCGGCCCGCAAGACCTACGATGGCGATGGTCAGAACAGTGAAGGCGAGCGTCGAGAAAGCCCGGCATTGGCTCGGCAATTCGCCGACTACAACGCCCTGATCGCTGATGAAACCTTCAGCGGCTGGGCCGAGACACTCTATCGCCCCCTGCTGGACGCCCCCTGGCGTTCAGCCCTCGGCGAGGAGGCCGGCGCATGA
PROTEIN sequence
Length: 1151
MPDASSLTPGFMVVHGNRLDELRSLVVSWMRRYPLAPLENEIALVQSNGIAQWLKLALAEDPEEDDSGGCGIAAAIDVQLPGSFMWQLYRLVLGRDEIPPKSLLDKAPLTWRLMRLLPELIDEPHFEPLQRFLTHDSDLRKRYQLAERLADLFDQYQVYRADWLEDWAAGRHSLRNVRGEAKALTPANCWQAELWRALLLDVGTEGMAQSRAGVHQRFIERINNLDQAPAGLPSRVIVFGISSLPAQALEALAGLARFSQVLLCVHNPCRHHWADIVADKDLLRHQYKRQARKAGMPLALDPQTLHQHAHPLLAAWGKQGRDYINLLDSYDDPNSYRAAFRDGRIDLFSDSQPRTMLQQLQDDILELRPLNETRELWPEVDLQQDQSIRFHIAHSAQREVEILHDQLLARFSAEPDLRPRDVIVMVPDIDSYAPHIRAVFGQLERDDRRFIPFTLTDQGQRGRDPLLIAVEHLLKLPDSRFPVSEILDLLDVPALRARFGVDEADLPTLHRWIEGAGIRWGMNAEQRAELGLPQELEQNSWRFGLRRMLLGYAVGRSDACDGIEPYDEIGGLDAALIGPLVALLDALQIAYQQLTQPAVPAQWGERLQHLLEQFFLASTEHDDYLLGQLEDLRENWLETCDSVGLQDQLPLTVVREAWLAGLDQGRLSQRFLAGAVNFCTLMPMRAIPFKLVCLLGMNDGDYPRAQPPLDFDLMGSDYRPGDRSRREDDRYLLLEALLSARDQLYVSWVGRSIRDNSERPASVLIGQLRDHLAGGWRLADAQQSLLEALTQEHPLQPFSARYFHDNDVLFSYAREWQVLHQAPAETGTTERLEPYVQDEPLSLAQLQDFLRNPVRHFFSQRLKVFFEAMEAPLADEEPFVLDALQRYSLSDSLLEAALSDAAHPDQALQAQAQRLQASGLLPMAGFGECLQRELMEPLPDLLQRYRQLLDLWPTPVTSALPVSLELQGVRLEGWLSHLHQRADGGLLAVTTIPNGIGSLKTRKWHRLIKPWINHLLACASGYSLTTALVASDDSLLLPPLEQDQARAILGNLLLAWQSGMRQPLPVAVKTAFAWLGQTDPDKAAAAARKTYDGDGQNSEGERRESPALARQFADYNALIADETFSGWAETLYRPLLDAPWRSALGEEAGA*