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S15_scaffold_2_curated_2

Organism: S15_RifCSP_Pseudomonas_62_25_curated

near complete RP 51 / 55 MC: 3 BSCG 51 / 51 MC: 2 ASCG 14 / 38 MC: 1
Location: 3618..7310

Top 3 Functional Annotations

Value Algorithm Source
RecBCD enzyme subunit RecB {ECO:0000256|HAMAP-Rule:MF_01485}; EC=3.1.11.5 {ECO:0000256|HAMAP-Rule:MF_01485};; Exonuclease V subunit RecB {ECO:0000256|HAMAP-Rule:MF_01485}; Helicase/nuclease RecBCD subunit RecB {ECO:0000256|HAMAP-Rule:MF_01485}; TaxID=1500687 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. St29.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.5
  • Coverage: 1230.0
  • Bit_score: 2336
  • Evalue 0.0
recB; exodeoxyribonuclease V subunit beta (EC:3.1.11.5) similarity KEGG
DB: KEGG
  • Identity: 94.2
  • Coverage: 1230.0
  • Bit_score: 2335
  • Evalue 0.0
  • rbh
Exodeoxyribonuclease V, beta subunit n=1 Tax=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) RepID=Q4KIQ5_PSEF5 similarity UNIREF
DB: UNIREF100
  • Identity: 94.2
  • Coverage: 1230.0
  • Bit_score: 2335
  • Evalue 0.0
  • rbh

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Taxonomy

Pseudomonas sp. St29 → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 3693
ATGACTCAACAAGTCCCCCTGGCCCTGGCCTTCCCGCTACGGGGCAGCCAACTGATCGAGGCCAGTGCCGGCACCGGCAAGACCTTCACCATCTCCGCGCTCTATCTGCGTCTGGTGCTGGGCCACGGTGGCGAGTCCGCAGGCTTTGGTCGCGAATTGCTGCCACCGCAGATCCTGGTGGTGACCTTCACCGATGCGGCCACCAAGGAATTGCGCGAACGCATCCGCACCCGTCTGGCGGAGGCCGCACGTTTCTTCCGTGACGAAACCAGCGCCCCCGACAGCCTGATCGTCGAGCTGCGGGAGCAGTACCCCGCCGAACAATGGGCCGCCTGCGCCAACCGCCTGGACATCGCCGCGCAGTGGATGGATGAGGCCGCCGTCTCCACCATTCACAGCTGGTGCCAACGCATGCTCCGCGAGCACGCTTTCGACAGCGGCAGCCTGTTTACCCAGACCCTGGAAACCGACCACAGCGATCTGCTGGGTCAGGTGCTGCGCGATTACTGGCGCTTGTTCTGCTATCCGATGCAGGGCGATGCGCTCAACTGGGTGCGCTCCAACTGGGTCGGCCCGGCCCAATTGCTGCCCCGGGTGCGGGCGATGTTCGGCAGCGAGCGTCGTGAGCCGTCGGAACAGACCCCCAGTGAATTGATCGAAGCCTGTTTGCAGGAGCGTCGGGAAGCGCTGGTGCAACTCAAGGCGCCCTGGCGGCAATGGGCGGTGGAGTTGCGGGAGATCTGTCTGCAAGGCGTTGCCAGCAAGAGTGTCGACGGCCGCAAGATGCAGGCCCGCTTCTTCGAGCCCTGGTTTGAAAAGATCATTGCCTGGGCCGAGGACGAATCCGTTGAGCAGTTGGATATTGGCACCGGCTTCACCCGCCTGACCCCAGACGGAATGAGCGAGGCCTGGAAAGGTGAAGCTCCGCAGCACCCGGGGCTCGATGCCATGGCTGGACTCAAGGCCAGCCTCGACGCCTTGCCCAGCCCGGACGCCGCAGTCCTGCAGCATGCTGCGCAGTGGGTCGGTGCGCGTTTTGAAGAAGAGAAGCGTCGCCGCGCCGAAATGGGCTTTGACGATATGTTGCTGCGTCTGGACAGCGCCCTGCAAAGCGACGGCGGCGAGCGCCTGGCGACTCTGATCCGCGAGCAGTTCCCGGTGGCCCTGATCGACGAGTTCCAGGACACCGATCCGGTGCAGTACCGGATCTTCGAAAGCATCTACCGCATCGAGGCCAACGATCCCGAAACCGGGCTGTTCCTGATTGGCGACCCCAAGCAAGCGATCTACGCCTTCCGTGGCGCCGACATCTACACTTACCTGCGGGCCCGCCAGGCAACTGCGGGACGCTTGCACACCCTGGGCACCAACTTTCGTTCCAGCCAGGCCATGGTCAGTGCGGTCAACCATGTGTTCCTGCAAGCCGAACAGCGCCAGCAAGGGCAGGGGGCTTTCCTGTTTCGTGAAGAGGATGGCGAGAATCCGGTGCCCTTCCTGGCGGTAGCCGCTCAGGGCCGCAAGGAGCGCCTGCAGGTGGATGGCCAAGCGGTGCCAGCGCTGAACTTCTGGCAACTGCCCTCGGAGCAGCCGCTGTCCGGGGCCCAGTATCGCCAGCAGCAGGCAGCGGCCTGTGCCAGTGCCATTGTCGATCTGCTCAATGGCGGTCAGCAGGGGCGCAGTGGCTTTGTCCGCGACCATCAGGAACTCAAGGGCCTGTTGCCAGCGGATATTGCCATCCTGGTCCGCGACGGCAAGGAGGCCCAGGCGGTGCGCGGTGAACTGGCCGCCCGCGGGGTGCGCAGCGTGTATCTCTCGGACAAGGACTCGGTGTTCGCCGCCCAGGAAGCCCGGGACCTGCTGGTATGGCTCAAGGCTTGCGCCGAACCGGATGTGGAGCGTCCGCTGCGGGCCGCCCTGGCCTCCCTGACCCTGAACCTGTCCCTGGTGGAACTGGAGCGGCTGAACCAGGACGAACTGGCCTGGGAAGCCCGAGTCATGCAGTTCCGCGGATACCGCACGATCTGGCGCAGCCAGGGCGTGTTGCCGATGCTCCGACGCTTGCTCCATGACTTCCAGCTGCCCCAGGCGCTGATGGCCCGCAGCGACGGCGAGCGGGTGCTGACCAATCTCCTGCACCTGTCTGAGTTGTTGCAGCAGAACGCTGCGGAACTGGACGGTGAGCAGGCGCTGATCCGCCATCTGGCCGAGCATCTGGCGTTGTCCGGGCAGGCCGGTGAAGAGCAGATCCTGCGCCTGGAAAGCGACGAGCAACTGGTCAAGGTGGTGACCATCCACAAGTCCAAGGGCCTGGAATACCCCTTGGTGTTCCTGCCCTTCATCTGCTCCACCAAACCGGTGGATGGCAGTCGCCTGCCGCTGCATTACCACGATGCTGCCGGCAAGGCCCAGGTCAGTTTGCGACCGACGCCGGAGCTGATCGCCCAAGCCGATGAGGAGCGTCTGGCGGAAGATCTGCGTCTGCTCTACGTGGCCCTGACCCGGGCCCAGCATGCCTGCTGGCTGGGAGTGGCCGACCTCAAGCGCGGCAACCACAGCAGCTCGGTGTTGCACTTGTCGGCCCTGGGCTACCTGCTTGGCGGCGGTGCCCTGTTGGGCGAGTCCAAGGGATTGCTGCGCTGGCTCCTGGACTTGCAGCAAGGCTGTGAGGCCATCGGTGTCAGCGAGCTGCCTGCGGCCGATGACCAGCGCTTTTACCCACCGCGCAATGACGCCAGGCTGCTGGCCCCGTTGCAGCCGATTCGACGGGCGGCGGAGAACTGGTGGATCGCCTCCTACAGTGCCTTGCGCATCAGCGATACCTTGGGCAGCGGCAGCACCGAAGCACCGGAAAATCCCCAGGCACAGAAGCTCTTCGACGATGAGCGGCTGGACCCCGAGGCCCCTCGGGAAGTCGTCGCCAGTGGTGGCGATATTCACCGGTTTCCCCGGGGGCCGAACCCCGGCACTTTCCTCCACGGTCTGCTGGAATGGGCCGGGGAGGAGGGTTTTGCCGCCGCCCCCGCGGTGATCGAGGATGCCATCGCCCGCCGTTGCAATCGTCGCGGCTGGCAAGGCTGGATTTTGACCCTCAGCGATTGGCTGCAGCACTTGTTGCAGGCGTCCCTGCCTGTGGGGGATGGGCAACCGCCAGTGGTGCTGGGGCGACTGACCCAGTACCGGGTCGAAATGGAGTTCTGGTTTGCCAGCCACAAGGTCGACGTACTCAAACTCGACGAGCTGGTGCGCCAGCAGACCCACCAGGGCGCGCCTCGGGTCACCGCCGAGCCGGTGCTGCTCAATGGCATGTTCAAGGGCTTCATCGACCTGACATTCGAACATCAGGGCCGCTATTACGTGGCCGACTACAAATCCAACTGGCTGGGCGTGGACGACGCGGCCTACACCGAGCAGGCCATGGAACAATCGATTCTCGACAACCGCTACGACCTGCAATACGTGCTCTACCTGCTGGCGCTGCACCGGCAGCTGAAGGCCCGGCTGGCGGACTACGATTACGATCGGCACATCGGCGGCGCCTTGTACCTGTTTTTGCGCGGTAGTCGCTCCGCGAGCCAGGGCGCGTACTTTGCCCGGCCGCCACGGCAGTTGATCGAACGCCTCGACCGCATGTTCCAGGGCCAGCCCGAGCCGCCCAAGGCCGAGCCCGCCTGGGAACAGGGAGTGCTGTTATGA
PROTEIN sequence
Length: 1231
MTQQVPLALAFPLRGSQLIEASAGTGKTFTISALYLRLVLGHGGESAGFGRELLPPQILVVTFTDAATKELRERIRTRLAEAARFFRDETSAPDSLIVELREQYPAEQWAACANRLDIAAQWMDEAAVSTIHSWCQRMLREHAFDSGSLFTQTLETDHSDLLGQVLRDYWRLFCYPMQGDALNWVRSNWVGPAQLLPRVRAMFGSERREPSEQTPSELIEACLQERREALVQLKAPWRQWAVELREICLQGVASKSVDGRKMQARFFEPWFEKIIAWAEDESVEQLDIGTGFTRLTPDGMSEAWKGEAPQHPGLDAMAGLKASLDALPSPDAAVLQHAAQWVGARFEEEKRRRAEMGFDDMLLRLDSALQSDGGERLATLIREQFPVALIDEFQDTDPVQYRIFESIYRIEANDPETGLFLIGDPKQAIYAFRGADIYTYLRARQATAGRLHTLGTNFRSSQAMVSAVNHVFLQAEQRQQGQGAFLFREEDGENPVPFLAVAAQGRKERLQVDGQAVPALNFWQLPSEQPLSGAQYRQQQAAACASAIVDLLNGGQQGRSGFVRDHQELKGLLPADIAILVRDGKEAQAVRGELAARGVRSVYLSDKDSVFAAQEARDLLVWLKACAEPDVERPLRAALASLTLNLSLVELERLNQDELAWEARVMQFRGYRTIWRSQGVLPMLRRLLHDFQLPQALMARSDGERVLTNLLHLSELLQQNAAELDGEQALIRHLAEHLALSGQAGEEQILRLESDEQLVKVVTIHKSKGLEYPLVFLPFICSTKPVDGSRLPLHYHDAAGKAQVSLRPTPELIAQADEERLAEDLRLLYVALTRAQHACWLGVADLKRGNHSSSVLHLSALGYLLGGGALLGESKGLLRWLLDLQQGCEAIGVSELPAADDQRFYPPRNDARLLAPLQPIRRAAENWWIASYSALRISDTLGSGSTEAPENPQAQKLFDDERLDPEAPREVVASGGDIHRFPRGPNPGTFLHGLLEWAGEEGFAAAPAVIEDAIARRCNRRGWQGWILTLSDWLQHLLQASLPVGDGQPPVVLGRLTQYRVEMEFWFASHKVDVLKLDELVRQQTHQGAPRVTAEPVLLNGMFKGFIDLTFEHQGRYYVADYKSNWLGVDDAAYTEQAMEQSILDNRYDLQYVLYLLALHRQLKARLADYDYDRHIGGALYLFLRGSRSASQGAYFARPPRQLIERLDRMFQGQPEPPKAEPAWEQGVLL*