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S15_scaffold_2_curated_3

Organism: S15_RifCSP_Pseudomonas_62_25_curated

near complete RP 51 / 55 MC: 3 BSCG 51 / 51 MC: 2 ASCG 14 / 38 MC: 1
Location: 7307..9388

Top 3 Functional Annotations

Value Algorithm Source
recD; exodeoxyribonuclease V subunit alpha (EC:3.1.11.5) similarity KEGG
DB: KEGG
  • Identity: 94.2
  • Coverage: 693.0
  • Bit_score: 1305
  • Evalue 0.0
  • rbh
RecBCD enzyme subunit RecD {ECO:0000256|HAMAP-Rule:MF_01487}; EC=3.1.11.5 {ECO:0000256|HAMAP-Rule:MF_01487};; Exonuclease V subunit RecD {ECO:0000256|HAMAP-Rule:MF_01487}; Helicase/nuclease RecBCD subunit RecD {ECO:0000256|HAMAP-Rule:MF_01487}; TaxID=220664 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.2
  • Coverage: 693.0
  • Bit_score: 1305
  • Evalue 0.0
Exodeoxyribonuclease V, alpha subunit n=1 Tax=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) RepID=Q4KIQ4_PSEF5 similarity UNIREF
DB: UNIREF100
  • Identity: 94.2
  • Coverage: 693.0
  • Bit_score: 1305
  • Evalue 0.0
  • rbh

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Taxonomy

Pseudomonas protegens → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2082
ATGACCCAGGATCTGTTTGCCCAGTTGGCCGAGCCGCCAGCGCCCCAGTTCGACTTGGCGCCCCTGGCTCGCGCCGAAGACCTACTGTTGTTGTTAGAGCGTTGGGTCGAACGCGGCTGGCTGCGGGCCCTGGACAAGGCTTTTGTCGGTTTCCTCCATGAGCTGGACCCCGGCTGCGATCCGTTGGTGCTCATGGCCGCGGCCCTGACCAGTCACCAGTTGGGCCATGGGCATGTCTGCCTGGACCTGTTCGAAACCCTCAAGGAGCCGGATTTCGCCCTGTCGCTGCCGCCGGAAGGGGATTCGCAAGGCGGTGCCACGGTGCTGCCTTCCCAGGTGTTGGCGAATCTGGAGGGGGCGCACTGGTGCAAGGTCCTGGCCGGCAGTCGGCTGGTGGCCCTGTCGGCTGATCACGGCGAGGCGTCCCAGCAGCGGCCGTTGGTGCTGTCCGGAAAGCGCCTATACCTGCGGCGCTACTGGGCCTATGAACGGCGGATCGACAATGCCCTGCGCCAGCGCCTGGCGTCGACGGAAGCGACTCCGGAGAATCTGGCCCAGCGCCTGGACGGGCTGTTTGGCCCGGCCAAGGCTGCCGGGCCCATCGATTGGCAGAAACTCGCCTGTGCCCTGGCGACCCGAGGCGCCTTCAGCATCATCACCGGTGGCCCCGGCACGGGCAAAACCACCACCGTGGTGCGTCTGCTGGCGTTGCTCCAGGCCCCGGCGGTGGAGGCGCGCAAACCCTTGCGCATTCGTCTGGCGGCGCCCACTGGCAAGGCCGCGGCCCGCCTTACCGAGTCCATCAGCCTGCAAGTGCGGTCCCTGGCAGTCGCCGACGAGGTACGGGAAAAGATCCCCAGCGAGGTGACCACGGTGCACCGCTTGCTGGGCAATCGCCCGGGCACCCGGCATTTCCGCCACCACGCCGGCAACCGTCTGCCCCTGGATGTGCTGGTGGTGGACGAAGCTTCGATGATCGACCTGGAAATGATGGCCAATCTGCTGGACGCCTTGCCCATTCATGCCCGCCTGGTGCTGCTGGGAGACAAGGATCAACTGGCGTCGGTGGAGGCGGGGGCGGTGCTCGGTGACCTGTGTCGCGATGCCGAGGCCGGCTGGTACAACCCGCAGACTCGCGCCTGGCTGGAAGCGGTCAGCGCTGAGAACCTGGGCGCCAGCGGCTTGCAGGAAGACACCGGGCACCAGCATCCCCTGGCGCAGCAGGTGGTGATGCTGCGCCACTCCCGGCGCTTCGGCGAAGGCAGTGGCATTGGCCAGCTGGCGCGCTGGGTCAATCAACAACAGGCCGAGGAGGCCCGGCGCCTGCTGGCGGCTCGCAGCCATGCGGACTTGTACAGCTTGAGTCTCAAGGGCGAGCAGGACCGAGCCCTTGAGCGCCTGTTGCTGGAAGGCCACGGCGAGGGGCCACAAGGCTATCGGCATTACCTGAATGTGCTGCGCAGTCAGCGTCCACCCGCGGACACCGCCCTGGAAGACCGCCGCTGGACTGATTGGGCGCGCAACGTCCTGCAGGCCTTCGATCGCTTCCAGTTGCTCTGTGCCGTGCGCAAGGGGCCGTGGGGCGTCGAAGGATTGAACCTGCGGATCACCCAGGCATTGTTCAAGGCTCGGCTGATCGACAGCGACCAGCAATGGTACGAAGGTCGCCCCGTGCTGATGACCCGTAACGACTATGGTCTGGGCCTGATGAATGGCGATATTGGCATCGCCCTCAAGCTGCCGGAACATGAGGGGCCGCAAGCCGGGCGTCAGGTGCTGCGGGTGGCTTTCCCGCGCAACGATGGCCAGGGTGGGGTACGCCTGGTACTGCCGAGCCGGCTCAATGATGTGGAAACGGTCTACGCCATGACCGTGCACAAGTCCCAGGGTTCAGAGTTCGCCCATACTGCGCTGATCCTGCCCGACGCCCTGAACCCGGTGCTGACCAAGGAATTGATCTATACAGGAATCACCCGGGCCAAGGATTGGTTCAGCCTGATCGAGCCTCGGGCCGGGGTGTTTGAAGAGGCGGTGCGGCGCAAGGTCAAGCGCCTTAGCGGGTTGATGCTGGAACTGGACTGA
PROTEIN sequence
Length: 694
MTQDLFAQLAEPPAPQFDLAPLARAEDLLLLLERWVERGWLRALDKAFVGFLHELDPGCDPLVLMAAALTSHQLGHGHVCLDLFETLKEPDFALSLPPEGDSQGGATVLPSQVLANLEGAHWCKVLAGSRLVALSADHGEASQQRPLVLSGKRLYLRRYWAYERRIDNALRQRLASTEATPENLAQRLDGLFGPAKAAGPIDWQKLACALATRGAFSIITGGPGTGKTTTVVRLLALLQAPAVEARKPLRIRLAAPTGKAAARLTESISLQVRSLAVADEVREKIPSEVTTVHRLLGNRPGTRHFRHHAGNRLPLDVLVVDEASMIDLEMMANLLDALPIHARLVLLGDKDQLASVEAGAVLGDLCRDAEAGWYNPQTRAWLEAVSAENLGASGLQEDTGHQHPLAQQVVMLRHSRRFGEGSGIGQLARWVNQQQAEEARRLLAARSHADLYSLSLKGEQDRALERLLLEGHGEGPQGYRHYLNVLRSQRPPADTALEDRRWTDWARNVLQAFDRFQLLCAVRKGPWGVEGLNLRITQALFKARLIDSDQQWYEGRPVLMTRNDYGLGLMNGDIGIALKLPEHEGPQAGRQVLRVAFPRNDGQGGVRLVLPSRLNDVETVYAMTVHKSQGSEFAHTALILPDALNPVLTKELIYTGITRAKDWFSLIEPRAGVFEEAVRRKVKRLSGLMLELD*