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S15_scaffold_2_curated_15

Organism: S15_RifCSP_Pseudomonas_62_25_curated

near complete RP 51 / 55 MC: 3 BSCG 51 / 51 MC: 2 ASCG 14 / 38 MC: 1
Location: 19274..20818

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, GntR family/aminotransferase, classes I and II n=2 Tax=Pseudomonas protegens RepID=Q4KIP2_PSEF5 similarity UNIREF
DB: UNIREF100
  • Identity: 91.8
  • Coverage: 499.0
  • Bit_score: 911
  • Evalue 2.20e-262
  • rbh
mocR1; putative rhizopine catabolism regulatory protein MocR similarity KEGG
DB: KEGG
  • Identity: 91.2
  • Coverage: 514.0
  • Bit_score: 932
  • Evalue 4.50e-269
  • rbh
Transcriptional regulator, GntR family/aminotransferase, classes I and II {ECO:0000313|EMBL:AAY96156.1}; TaxID=220664 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 91.8
  • Coverage: 499.0
  • Bit_score: 911
  • Evalue 3.10e-262

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Taxonomy

Pseudomonas protegens → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1545
GTGGCTGCCTTAAGTGCAGAATTTTTACTCTCCCAGGCAGACCACATGTCCCGGACCTTCGAGCTTGAAACCCTCAAGATGCGCCTCAGCGACCCTGAGTTCCGCCCTCTGGACCTGCACCAGCGCATTCAGCGTGCGTTGCGCGGGCTGATCCTCGATGGCGCCCTGGGGCCTGGGGTGAAGTTGCCGGCTAGTCGGGCCCTGGCCAAGTCGCTGGCGGTCTCCCGGGACACCGTGGAAAACGCCTATGTGCAGTTGCAGCGCGACGGTTTTATCCAGCGCCGCGAAGGTTCGGGGAGTTATGTCTGTGAAGCCATCGGTGCCCAGTTGCGCGGCTCGGTCCGCCGCCGCCAGCAGTTGCAGGGGCAGCCTGGGCACAGCCGAGAGCCTGGGGCGGGCCTGAGCCGGCGCGGCGCGCTGCTGTTGCAAAGGGGCGGCGTCAGCGATCAGCAGGCCGTCACCGCCTTTGCTACCGGGCTGCCGGAAACCCGCAGCTTCCCGCTGGACGTCTGGGAACGCCTGCAACGCCAGGCGCTGAAGGATTACCGCGCCAATGTACTGCTGCATGGTGATCCCCAGGGCGCGCTGCCCCTGCGCAAGGCCATTGCCGCCTACCTGAACCTGGAGCGCGGAGCCAAGGTGCAGCCCGAGCAGATCCTGGTGCTGAGCAGTACCCGCCAGGCGCTGTTTCTGTGCGCGCAACTGCTGGTGGACGCCGGCAAGCCGATCCTGTTGGAGAACCCGGGCTACTTCGGCGCACGCAAGGCATTCGAGGCCGCCGAGGCGCGCATCGTGCCCATCGATGTCGACAGCCAGGGCATTCGCACCGACCTGCTGCGGGCCGACCGCAGTGGCGCCCGCTGTGTCTATGTGACGCCGTCCCATCAGTACCCCACGGGCGTCACCCTGTCCCTGGAGCGCCGCCTGGAACTGACCCGCTGGGCCGCCGAGCAGGAGAAATGGATCATCGAGGACGACTACGACAGCGAGTTCCACTACGACGGTTTGCCCACCGCCTGTGTCCAGGGCCTGGACCCGTATCAGCGCACCCTTTACATCGGCACCTTCAGCAAGACCCTCTACCCGGGCCTGCGCATGGGCTACATGGCCCTGCCCAGCGAGCTGGTGAGCGCCTTCAGCGCGGCCCGCAGCATCATGGACGGGCACACGCCGCAGATCCTCCAGCTGACCCTGGCGCGGTTCATGGAGGAGGGGCACTACAACGCCCATGTGCGGGCCATGCGCAAGCTGTACGCCGAGCGTCGGCAAGCCATGCTCGATGCCATCGGGCGGCATTTGCAGGGCATTGCCGTGGCCTTGCCGCCACCGGGCGGGTTGCAGATTCCTTGCCTGCTGGAGCCCGGCTGGAGCGAAGCGTTGACCCAGCAACGAGCCGCCAGGGCCGGCATCCAGTTACCAGGGCTCGGCCGGCTGTATGCCGGGGAGCACAAGCAGCCAGGCTGGTTGCTGGGCTACGCCTCGCTGAGCGCCCATGAAATCGAAACGACCATGGCACGCCTGGCCCAGGCCCTGAAAAAGGCCTAG
PROTEIN sequence
Length: 515
VAALSAEFLLSQADHMSRTFELETLKMRLSDPEFRPLDLHQRIQRALRGLILDGALGPGVKLPASRALAKSLAVSRDTVENAYVQLQRDGFIQRREGSGSYVCEAIGAQLRGSVRRRQQLQGQPGHSREPGAGLSRRGALLLQRGGVSDQQAVTAFATGLPETRSFPLDVWERLQRQALKDYRANVLLHGDPQGALPLRKAIAAYLNLERGAKVQPEQILVLSSTRQALFLCAQLLVDAGKPILLENPGYFGARKAFEAAEARIVPIDVDSQGIRTDLLRADRSGARCVYVTPSHQYPTGVTLSLERRLELTRWAAEQEKWIIEDDYDSEFHYDGLPTACVQGLDPYQRTLYIGTFSKTLYPGLRMGYMALPSELVSAFSAARSIMDGHTPQILQLTLARFMEEGHYNAHVRAMRKLYAERRQAMLDAIGRHLQGIAVALPPPGGLQIPCLLEPGWSEALTQQRAARAGIQLPGLGRLYAGEHKQPGWLLGYASLSAHEIETTMARLAQALKKA*