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S15_scaffold_2_curated_21

Organism: S15_RifCSP_Pseudomonas_62_25_curated

near complete RP 51 / 55 MC: 3 BSCG 51 / 51 MC: 2 ASCG 14 / 38 MC: 1
Location: 26838..27989

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, AraC family n=2 Tax=Pseudomonas protegens RepID=Q4KIN6_PSEF5 similarity UNIREF
DB: UNIREF100
  • Identity: 92.3
  • Coverage: 337.0
  • Bit_score: 624
  • Evalue 5.30e-176
  • rbh
AraC family transcriptional regulator {ECO:0000313|EMBL:BAQ78647.1}; TaxID=1500687 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. St29.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.5
  • Coverage: 337.0
  • Bit_score: 646
  • Evalue 2.40e-182
transcriptional regulator, AraC family similarity KEGG
DB: KEGG
  • Identity: 92.3
  • Coverage: 337.0
  • Bit_score: 624
  • Evalue 1.50e-176
  • rbh

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Taxonomy

Pseudomonas sp. St29 → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1152
ATGGGGGCGGGTTATCCACTTAGTGGGCGATTGCTATCCACTGGGTTGGCAGCGTTGCCGGCTGGCGCAAAACTTGCCCTGTCACACAAGACGCGCCGTCAGAGCGCGCTGAATAATAATTGCCGTGGGTGCGCCGTGATGAATAGCAAGGCTGATGGGCTGTTTCGCGAGATTCGTATCGATCGCTATGACCTTGAAGGGGCCAGGAGCTGGATGGCGGGTATCTGTGGGCCGCACCGCCTGGAAACCGCTAACCCCGAACGCATTCGTTTCCACCACAGTGCCAACGTCCTCAGGTCACGCGCCACGACCCTGGGCATCATCGAATACGGCACCGACGTGGTCGTCGATATCGAGGACACCGAGCGCTTCAGCAGCTACAGCCTGAGCCTGCCGCTGTGCGGCGAGCAGGAGCTGAGCAAGGACGGTCGCCTGCTGCGTTCGGACCCTGACCAGGGGGTGATCATTGCCCCCAACGAAAGCCAGGTGCTGGCCATCTCCGGCGACTGCCGCAAGTTGCAGGTGGTGATTTCCCGGCCGGCCATGAGCGAAGCCCTGGAGGCATTGCTGCAACGCCCGGTCGAGCAGCCGCTGCGCTTCGAGCCTGCCATGGACGCACGGCAGGGCGCCGCCGCGGCCTGGTGGCGCATGGCGCATCACTTCATTGGTGAACTGGCCCAGGGCAACGAACTTTACGAGCAACTGGCCTTCACCCGGGAAATCGAGAGCTCCCTGATCAAGGGGCTGATCCTGGCCCAACCCAACAACTACTCCGCGGAGCTGCAGGCGATGCTCGGGGTCAAGCTGCCGCATTACCTGGTGCGGGCCCGCCAGTACCTGCACGAGCATGCCCGAGAGGCGGTGCACCTGGAGGACCTGGAAGCCGCCGCCGGTGTTTCACGCTTCAAGCTGTTCGAGGCCTTTCGCAAGTACTTTGCCCTGTCGCCCATGGCCTACCTCAAGCGACATCGACTCAATGGCGTGCGCCAGGACATTCTCGAACACGGCGCCGCGCGCAATATTTCCGAGATTGCCCTGGCCTGGGGTTTTACCCACCTGGGGCGGTTTTCCGCGGAGTACCGCAAGCTGTTCGACGAGGCGCCGAGCGCCACAGTCCAGCGCCACCAGGCGCGGCGCCCGGTGGGGTTCTAG
PROTEIN sequence
Length: 384
MGAGYPLSGRLLSTGLAALPAGAKLALSHKTRRQSALNNNCRGCAVMNSKADGLFREIRIDRYDLEGARSWMAGICGPHRLETANPERIRFHHSANVLRSRATTLGIIEYGTDVVVDIEDTERFSSYSLSLPLCGEQELSKDGRLLRSDPDQGVIIAPNESQVLAISGDCRKLQVVISRPAMSEALEALLQRPVEQPLRFEPAMDARQGAAAAWWRMAHHFIGELAQGNELYEQLAFTREIESSLIKGLILAQPNNYSAELQAMLGVKLPHYLVRARQYLHEHAREAVHLEDLEAAAGVSRFKLFEAFRKYFALSPMAYLKRHRLNGVRQDILEHGAARNISEIALAWGFTHLGRFSAEYRKLFDEAPSATVQRHQARRPVGF*