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S15_scaffold_2_curated_28

Organism: S15_RifCSP_Pseudomonas_62_25_curated

near complete RP 51 / 55 MC: 3 BSCG 51 / 51 MC: 2 ASCG 14 / 38 MC: 1
Location: 34144..34908

Top 3 Functional Annotations

Value Algorithm Source
membrane protein n=1 Tax=Pseudomonas fluorescens RepID=UPI00030601C5 similarity UNIREF
DB: UNIREF100
  • Identity: 94.9
  • Coverage: 254.0
  • Bit_score: 475
  • Evalue 2.00e-131
  • rbh
membrane protein similarity KEGG
DB: KEGG
  • Identity: 95.3
  • Coverage: 254.0
  • Bit_score: 476
  • Evalue 2.50e-132
Putative membrane protein {ECO:0000313|EMBL:AAY96169.2}; TaxID=220664 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.9
  • Coverage: 254.0
  • Bit_score: 475
  • Evalue 3.70e-131

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Taxonomy

Pseudomonas protegens → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 765
ATGAACAGCTCTCTCGCGTTTTATCAAAACCTCGGACTGGCCCTTTCTCTGCTAGTCATCGGCACCTTCGTACTGGCCGGCATGGTCAAGGGGGTGATCGGCCTCGGCCTGCCCACCATCGCCATGGGGCTGTTGGGGCTGGCTATGGCTCCGGCGCAGGCTGCAGCCTTGCTGATCATTCCGGCGACCCTGACCAATCTCTGGCAACTGGCCTTTGGCGGGCACCTGCCGGCCTTGCTCAAGCGCCTGTGGCCGATGTTGCTGGCGATCTTCGTCGGCACGGCCGCCGGTTCATTGTGGCTGGGCATCGAAGGCGGGCATTGGGTGGTGCGGGGGTTGGGCGCGGCGTTGCTGCTGTATGCGCTGAGCGGCCTGCTGTTGCCGACCCTGCGCGTGTCGCCGGCCCAGGAGCGCTGGCTGGCGCCGCTGTGCGGGCTGATCACCGGGGTCATCACTTCGGCCACCGGAGTGTTCGTGATCCCGGCGGTGCCCTATCTGCAGGCCCTGGGCTTGAACAAGGATCAGTTGGTGCAGGCCTTGGGCCTGTCGTTCACGGTGTCGACCCTGGCCCTGGCCGCCGGCCTGCTGTGGCGCGGCGCCCTGGGTGGCGCCGAGCTGGGGGCTTCCTTGCTGACCCTGGCCCCGGCGCTGTTGGGCATGTGGCTGGGGCAATGGTTGCGCCAGCGCATCAGCGCCTTGCTGTTCAAGCGGGTGTTCTTCATCGGCCTGGGGCTGCTGGGCGGGCATCTGTTGATCAGCGGCTAG
PROTEIN sequence
Length: 255
MNSSLAFYQNLGLALSLLVIGTFVLAGMVKGVIGLGLPTIAMGLLGLAMAPAQAAALLIIPATLTNLWQLAFGGHLPALLKRLWPMLLAIFVGTAAGSLWLGIEGGHWVVRGLGAALLLYALSGLLLPTLRVSPAQERWLAPLCGLITGVITSATGVFVIPAVPYLQALGLNKDQLVQALGLSFTVSTLALAAGLLWRGALGGAELGASLLTLAPALLGMWLGQWLRQRISALLFKRVFFIGLGLLGGHLLISG*