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S15_scaffold_5_curated_12

Organism: S15_RifCSP_Pseudomonas_62_25_curated

near complete RP 51 / 55 MC: 3 BSCG 51 / 51 MC: 2 ASCG 14 / 38 MC: 1
Location: comp(11116..12000)

Top 3 Functional Annotations

Value Algorithm Source
Probable 4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol deformylase ArnD {ECO:0000255|HAMAP-Rule:MF_01870}; EC=3.5.1.n3 {ECO:0000255|HAMAP-Rule:MF_01870};; TaxID=220664 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.3
  • Coverage: 294.0
  • Bit_score: 595
  • Evalue 2.80e-167
Probable 4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol deformylase ArnD n=1 Tax=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) RepID=ARND_PSEF5 similarity UNIREF
DB: UNIREF100
  • Identity: 98.3
  • Coverage: 294.0
  • Bit_score: 595
  • Evalue 2.00e-167
  • rbh
polysaccharide deacetylase similarity KEGG
DB: KEGG
  • Identity: 98.3
  • Coverage: 294.0
  • Bit_score: 595
  • Evalue 5.70e-168
  • rbh

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Taxonomy

Pseudomonas protegens → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 885
ATGCAAGCAGGTCTGCGCATTGATGTCGATACCTACCGCGGCACCCGGGAGGGGGTGCCACGGCTGCTCGAATCGCTGGACGAAGCCGGGGTCAAGGCCACGTTCTTCTTCAGCGTCGGGCCGGACAACATGGGGCGCCACCTGTGGCGCCTGATCCGTCCGCAGTTCCTCTGGAAAATGCTGCGTTCCAATGCCGCGGGCCTGTACGGCTGGGACATTCTCCTGGCCGGCACCGCCTGGCCGGGCAAACCCATTGGCCGGGACCTGGGGCACTTGATGCGCCAGACCCTGGCCGCCGGCCATGAAGTCGGCCTGCACGCCTGGGATCATCACGGCTGGCAGGCCAACACCGGGCGCTGGAGTCAGGCACAGCTGATCGAACAGATCCGCCGTGGCGTCGACAGCCTCAACGATATTCTCGGGCAAGCGGTGAGCTGCTCGGCGTCTGCCGGTTGGCGCGCCGATGAACGCGTCATCGAAGCCAAGCAACAGTTCGGCTTTCGCTACAACAGCGACTGCCGCGGCCAGAGCCTGTTCCAGCCACGACTGGCGGACGGCAGCCTGGGCGCCCCACAGATTCCGGTGGACCTGCCGACCTTCGACGAAGTGGTCGGGCCGGTGGTGGCCGCCAAGGATTTCAACCGCTACATCCTCGACCGGTTCAGTCCGGACAAACTCAATGTCTACACCGTGCATGCAGAAGTAGAAGGGATTCTCATGGCCAATGATTTCCGCCAGTTGCTGGCCAGCGCCAAGCAACGCGACATCCACTTTCAACCCCTGGGGCAGATGCTCCCGGCGGATCTGGCCAGCCTGCCGGCGGGCAAGGTCGTGCGTGGCGCGCTGCAAGGCCGGGAAGGCTGGCTGGGAGTGCAAGGCGCATGA
PROTEIN sequence
Length: 295
MQAGLRIDVDTYRGTREGVPRLLESLDEAGVKATFFFSVGPDNMGRHLWRLIRPQFLWKMLRSNAAGLYGWDILLAGTAWPGKPIGRDLGHLMRQTLAAGHEVGLHAWDHHGWQANTGRWSQAQLIEQIRRGVDSLNDILGQAVSCSASAGWRADERVIEAKQQFGFRYNSDCRGQSLFQPRLADGSLGAPQIPVDLPTFDEVVGPVVAAKDFNRYILDRFSPDKLNVYTVHAEVEGILMANDFRQLLASAKQRDIHFQPLGQMLPADLASLPAGKVVRGALQGREGWLGVQGA*