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S15_scaffold_5_curated_15

Organism: S15_RifCSP_Pseudomonas_62_25_curated

near complete RP 51 / 55 MC: 3 BSCG 51 / 51 MC: 2 ASCG 14 / 38 MC: 1
Location: comp(15028..16167)

Top 3 Functional Annotations

Value Algorithm Source
UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase {ECO:0000256|HAMAP-Rule:MF_01167, ECO:0000256|SAAS:SAAS00016536}; EC=2.6.1.87 {ECO:0000256|HAMAP-Rule:MF_01167, ECO:0000256|SAAS:SAAS00016523};; UDP-(beta-L-threo-pentapyranosyl-4''-ulose diphosphate) aminotransferase {ECO:0000256|HAMAP-Rule:MF_01167}; UDP-4-amino-4-deoxy-L-arabinose aminotransferase {ECO:0000256|HAMAP-Rule:MF_01167}; TaxID=1500687 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. St29.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.5
  • Coverage: 379.0
  • Bit_score: 731
  • Evalue 3.20e-208
arnB; UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase (EC:2.6.1.-) similarity KEGG
DB: KEGG
  • Identity: 95.5
  • Coverage: 379.0
  • Bit_score: 729
  • Evalue 4.20e-208
  • rbh
UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase n=1 Tax=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) RepID=ARNB_PSEF5 similarity UNIREF
DB: UNIREF100
  • Identity: 95.5
  • Coverage: 379.0
  • Bit_score: 729
  • Evalue 1.50e-207
  • rbh

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Taxonomy

Pseudomonas sp. St29 → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1140
ATGAACCAGGCTTTCCTTCCTTTCTCGCGCCCGAGTATCGGCGACGAAGAGATAGCTGCAGTGGAGCAGGTTCTGCGCTCCGGCTGGATCACCACCGGCCCGAAAAACCAGGAACTTGAACAGCAATTCGCCGACCGCGTTGGCGCCCGCCACGCCGTGGCCCTGTCGTCGGCCACCGGCGCCATGCACATCACCCTGCTGGCCCTGGGCATCGGTCCGGGGGATGAAGTCATCACCCCGTCGCAGACCTGGGTCTCCACCGCCAACATGATCTGCCTGCTGGGGGCGACCCCGGTATTCGTCGATGTCGATCCCGACACCCTGATGAGCGACGCCGCCATCATCGAGGCGGCCATTACGCCACGGACCAAGGCCATCATCCCGGTGCACTACGCCGGCGCCGCCTTCGACCTGGACCCGTTGTACGCCCTGGCGGACAAGCACGGCATCCCGGTGATCGAAGACGCCGCCCACGCCGCCGGCACCACCTATCGCGGCCGCGCCATCGGCGCGCGGGGCACGGCAATCTTTTCCTTACATGCCATCAAGAACATGACCTGCGCCGAAGGTGCGATGTTCGTCAGCGACGACCAAGCCCTGGTCGACCGGGTACGCATGCTCAAGTTCCACGGTCTGGGGGTGGACGCCTACGATCGCCTGACCCACGGTCGCAAGCCCCAGGCCCAAGTGATCGAGCCCGGATTCAAGTACAACCTGGCGGACATCAACGCCGCCATCGCCCTGGTACAGCTGCAGCGCCTGGACGACATCAATGCCAAGCGCGAAGTGCTGGCCAAGGCTTACCTGGAACGCCTCGAAGGCCTGCCGGTGCAACCCCTGCACCTGCCCCAGTACCCGCAGCAGCACGCCTGGCACCTGTTCATCCTGCGCATCGACGCCGAACGCTGCGGCCTGGACCGTGAAGCCTTCATGAAGGGCCTGCAGGAGCAGAACATCGGCACCGGCATCCACTTCATCGCCACTCACCTGCATACCTATTATCGACAGCGCTTCGCCGATGTGCGGCTGCCACACACCGAATGGAACTCGGCGCGTCTATGCTCGATCCCACTGTTCCCGGACATGACCCTCGACGATGTCGAACGGGTCTCCGATGCCATTGCCAACCTCCTGGACTGA
PROTEIN sequence
Length: 380
MNQAFLPFSRPSIGDEEIAAVEQVLRSGWITTGPKNQELEQQFADRVGARHAVALSSATGAMHITLLALGIGPGDEVITPSQTWVSTANMICLLGATPVFVDVDPDTLMSDAAIIEAAITPRTKAIIPVHYAGAAFDLDPLYALADKHGIPVIEDAAHAAGTTYRGRAIGARGTAIFSLHAIKNMTCAEGAMFVSDDQALVDRVRMLKFHGLGVDAYDRLTHGRKPQAQVIEPGFKYNLADINAAIALVQLQRLDDINAKREVLAKAYLERLEGLPVQPLHLPQYPQQHAWHLFILRIDAERCGLDREAFMKGLQEQNIGTGIHFIATHLHTYYRQRFADVRLPHTEWNSARLCSIPLFPDMTLDDVERVSDAIANLLD*