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S15_scaffold_5_curated_16

Organism: S15_RifCSP_Pseudomonas_62_25_curated

near complete RP 51 / 55 MC: 3 BSCG 51 / 51 MC: 2 ASCG 14 / 38 MC: 1
Location: 16645..17589

Top 3 Functional Annotations

Value Algorithm Source
Site-specific recombinase, phage integrase family n=2 Tax=Pseudomonas protegens RepID=Q4KC85_PSEF5 similarity UNIREF
DB: UNIREF100
  • Identity: 89.6
  • Coverage: 298.0
  • Bit_score: 536
  • Evalue 1.50e-149
  • rbh
Phage integrase family site specific recombinase {ECO:0000313|EMBL:BAQ81029.1}; TaxID=1500687 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. St29.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 93.1
  • Coverage: 303.0
  • Bit_score: 564
  • Evalue 5.70e-158
site-specific recombinase, phage integrase family similarity KEGG
DB: KEGG
  • Identity: 89.6
  • Coverage: 298.0
  • Bit_score: 536
  • Evalue 4.40e-150
  • rbh

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Taxonomy

Pseudomonas sp. St29 → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 945
ATGACTTCGCAGGAACAACCGGCCGTTGCCGACAACGCGCACAAGGCCAACCCGTTGCGCCTGTACCTGGCCCGTCTGGCGCCCTCCAGCCAGTCGACCCTGCGTTACGTGCTGCAGGACGCCGCCGATCGCCTGGGGTATGACGAACTCAACCTTGAGGACATCCCCTGGCACCACCTGCAACCCGAACAGGTGACGGCCCTGGTGGCCACATTGCGCCGTGACGGCTATGCCCCGAATACCTCGTCGCTGTACGTCAATGCCCTGCGCGGGGTGATGAACGAAGCCTGGCGCAGCAGTCTGATCAGCCAGGACCATCTGCTGAAAATGCGCTCGGTCAAGGCCATGGGCGGTACACGCCTGTCCCGGGGGCGCAATCTCAAGCGCGGGCTGATCCAGGACCTGATGGCGGTGTGTGCCGCCGACCCGCGGCCCCAGGGCGTGCGCGACGCGGCAATCATCGCGGTGCTGTACGGCTCGGGCATGCGCAAGTCCGAATCGGTGAACCTGGACCTGGCCCAGGTGGACTTCGTCCAGCGCAGCCTGCGGGTGCTGGCCAAGGGCAACAAACAACTGATCAAGTACGCCCCGGCCTGGGCCTTCGACAAGCTCCAGGCCTGGCTGGACCTGCGTCGCGCAGACTTGCCGGCAGGCCTTGAGGACGACGCTTTCCTGTTCAACCGGATTCGTCGCGGTGGTCATATCACCCGTGAACGCATCAGCAAGCACGCCATCTACTACATCGCCCGCCAGCGGGGCGCCCAGGTTGGCGTGCGCATCATGCCCCACGACTTTCGTCGTTCGTTCATTACCCGGGTGATCGAGGAACATGACCTGTCGATCGCCCAGAAGCTGGCGCACCACACCAATATCCAGACCACCGCCAGCTATGACATGCGTGATGACAATGAACGACGCCGGGCCATCGACCGCTTTGACCTGTGA
PROTEIN sequence
Length: 315
MTSQEQPAVADNAHKANPLRLYLARLAPSSQSTLRYVLQDAADRLGYDELNLEDIPWHHLQPEQVTALVATLRRDGYAPNTSSLYVNALRGVMNEAWRSSLISQDHLLKMRSVKAMGGTRLSRGRNLKRGLIQDLMAVCAADPRPQGVRDAAIIAVLYGSGMRKSESVNLDLAQVDFVQRSLRVLAKGNKQLIKYAPAWAFDKLQAWLDLRRADLPAGLEDDAFLFNRIRRGGHITRERISKHAIYYIARQRGAQVGVRIMPHDFRRSFITRVIEEHDLSIAQKLAHHTNIQTTASYDMRDDNERRRAIDRFDL*