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S15_scaffold_5_curated_30

Organism: S15_RifCSP_Pseudomonas_62_25_curated

near complete RP 51 / 55 MC: 3 BSCG 51 / 51 MC: 2 ASCG 14 / 38 MC: 1
Location: comp(28371..29021)

Top 3 Functional Annotations

Value Algorithm Source
SCO2-like protein n=2 Tax=Pseudomonas protegens RepID=R4RK02_9PSED similarity UNIREF
DB: UNIREF100
  • Identity: 97.7
  • Coverage: 216.0
  • Bit_score: 424
  • Evalue 4.50e-116
  • rbh
Sco1/SenC family protein {ECO:0000313|EMBL:BAQ81014.1}; TaxID=1500687 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. St29.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.1
  • Coverage: 216.0
  • Bit_score: 429
  • Evalue 2.60e-117
SCO2-like protein similarity KEGG
DB: KEGG
  • Identity: 97.7
  • Coverage: 216.0
  • Bit_score: 424
  • Evalue 1.30e-116
  • rbh

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Taxonomy

Pseudomonas sp. St29 → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 651
ATGCGCGGGTTTTTGCCTGTCTGGCTGTTCAAAGGGCGTTATTTCATGAGTGTTTTGCTGACTCGCCGCACCCTGCTTACCAGCGCCGGGGTGCTTGGCCTGGGCCTGCTCGCCGGTTGCGACAACAGTCCCCGACTGTCCTTCAAATATGGCAAGGACCTGAGCAATCAGATTCTCGGCCGCACCTTCAAACTCACCGATTCCCAGGGCGAAACCAAGTCGCTGTCCAGCTACCGTGGCCTGATGCCGATGATCTTCTTCGGCTTCACCCAGTGCCCGGCGGTCTGCCCCACTACCCTGGCCCGCGCCGCCCAGGCCAAGAAACTCATGGGCCGCGACGGCGACCGCCTGAAAGTGGTGTTCATCACCCTGGACCCCGAGCGCGACACGCCCGAGGTGCTGGACGCCTACGTCAAAGCCTTCGACCCGAGCTTCGAGGCGCTTTACGGCACCCTGGAAGAAACCGCGGCCACCGCCAAGGAATTTGGCGTGTTCTACGAAAAGATCCCCAGCGGCTCGACCTACACCCTGTCCCACACCGCCACCAGTTTCGTCTACGACTCCCGGGGCACCTTGCGCCTGGGTCTGTCCCAGTCCCTCAACGCCCAAGAGTGCGCGGAAGATCTGCTCACCGTCATGGAGGTCTGTTAA
PROTEIN sequence
Length: 217
MRGFLPVWLFKGRYFMSVLLTRRTLLTSAGVLGLGLLAGCDNSPRLSFKYGKDLSNQILGRTFKLTDSQGETKSLSSYRGLMPMIFFGFTQCPAVCPTTLARAAQAKKLMGRDGDRLKVVFITLDPERDTPEVLDAYVKAFDPSFEALYGTLEETAATAKEFGVFYEKIPSGSTYTLSHTATSFVYDSRGTLRLGLSQSLNAQECAEDLLTVMEVC*