ggKbase home page

S15_scaffold_161_curated_18

Organism: S15_RifCSP_Pseudomonas_62_25_curated

near complete RP 51 / 55 MC: 3 BSCG 51 / 51 MC: 2 ASCG 14 / 38 MC: 1
Location: 7455..7988

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L6 n=23 Tax=Pseudomonas RepID=RL6_PSEFS similarity UNIREF
DB: UNIREF100
  • Identity: 99.4
  • Coverage: 177.0
  • Bit_score: 345
  • Evalue 2.80e-92
  • rbh
50S ribosomal protein L6 similarity KEGG
DB: KEGG
  • Identity: 99.4
  • Coverage: 177.0
  • Bit_score: 345
  • Evalue 8.10e-93
50S ribosomal protein L6 {ECO:0000256|HAMAP-Rule:MF_01365, ECO:0000256|RuleBase:RU003870}; TaxID=1144334 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. GM60.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.4
  • Coverage: 177.0
  • Bit_score: 345
  • Evalue 4.00e-92

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pseudomonas sp. GM60 → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 534
ATGTCTCGCGTCGCTAAGAACCCCGTTAAGCTGCCAGCTGGTGTCGAAGTTAAATTCGCCGGCCAACAGCTTTCGGTGAAGGGTGCCAAGGGCACTCTCGAACTGAACGTTCACTCGTCCGTTGAAATTGTTGAGGAAGCTGGTGAGCTGCGTTTCGCTGCTCGCAATGGCGACCAACAAACTCGTGCAATGGCCGGTACCACTCGTGCTCTGGTAAACAACATGGTCCAAGGCGTTAGCCAAGGCTTCGAGCGTAAGCTCCAGCTGGTCGGTGTTGGTTACAAGGCACAAGCAAAAGGCACAGTGCTGAACCTGGCCCTCGGCTTCTCGCATCCAGTGGATTACGAACTGCCGGAAGGCATCACCGCTGAGACTCCTAGCCAGACCGATATCCTGATCAAGGGCATCGATAAGCAGCTGGTAGGTCAAGTGGCCGCTGAGATCCGCGACTTCCGTCCACCAGAGCCTTACAAAGGTAAAGGTGTGCGCTACGCGGACGAAGTCGTCCGTCGTAAAGAAGCCAAGAAGAAGTAG
PROTEIN sequence
Length: 178
MSRVAKNPVKLPAGVEVKFAGQQLSVKGAKGTLELNVHSSVEIVEEAGELRFAARNGDQQTRAMAGTTRALVNNMVQGVSQGFERKLQLVGVGYKAQAKGTVLNLALGFSHPVDYELPEGITAETPSQTDILIKGIDKQLVGQVAAEIRDFRPPEPYKGKGVRYADEVVRRKEAKKK*