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S15_scaffold_75_curated_1

Organism: S15_RifCSP_Pseudomonas_62_25_curated

near complete RP 51 / 55 MC: 3 BSCG 51 / 51 MC: 2 ASCG 14 / 38 MC: 1
Location: comp(2..1672)

Top 3 Functional Annotations

Value Algorithm Source
Outer membrane autotransporter n=1 Tax=Pseudomonas sp. CF161 RepID=S6IU07_9PSED similarity UNIREF
DB: UNIREF100
  • Identity: 85.3
  • Coverage: 558.0
  • Bit_score: 943
  • Evalue 9.70e-272
  • rbh
Cell surface receptor IPT/TIG domain-containing protein {ECO:0000313|EMBL:BAQ75352.1}; TaxID=1500686 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. Os17.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 86.7
  • Coverage: 557.0
  • Bit_score: 954
  • Evalue 5.90e-275
IPT/TIG domain/outer membrane autotransporter barrel domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 84.0
  • Coverage: 557.0
  • Bit_score: 929
  • Evalue 3.10e-268

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Taxonomy

Pseudomonas sp. Os17 → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1671
ATGAGAACACCGCTGACCGCGCCAGGTAACTGGCTGACACGCCCGCTGATTTCACTGTTTCTGTTGCTGGTCATGCTGAGCATGAGCAGCCAGGCCATGGCGGTTGCCCCCGTGATCACCAACCCGGCCTCCGGCAGCACCTTGCCCACCATCGCGGTGGGTCAGAGCATGAGCATCACCATCAGCTCTGTCGGCGGCACCATGCCCCTGGACCGCTGGGTGGAGTGCGACGCCAACGATCCGGACTACGATGGTGTGACCCCCTGCCTGCCACCGGGCCTGATCCTCGATGCGTCCCCCGGCAGCGCGACCACGGTGTTGCACGGCACCCCGACCACCGCCGGTAACTACACCTTCAGCATCACCCTCAATGACGGCAACAACGATGGCGGGGTCGCCACCTACAACCTGCTGGTCACCAGCTCCGCGACTCCGACCCTGACCTCGGTCACCCCGAACACCGGCAGCACCGCAGGCGCCACCTCCGTCACCCTCACCGGCACCAATTTTACCGGCGCCACAGCGGTGAGCTTTGGCGGGACAGCCGCCACCGGTTACATCGTCAACAACGCCACCACCATCACCGCCACCACCCCGGCCCATGCTGCAGGTGCGGTCAACGTTGCAGTCACCACACCGGGGGGCAGCGCCACCCTGACCAATGGCTATACCTACGCCGTGCCGGCCCCTACCGTCGGCCCGGTCAGCGCCACGGTGGCGGCCAACAGCAGCGCCAACCCGATTACCCTGAGCCTCAGCGGCGGCGCGGCCACCAGCGTCGCCGTGGCCAGCGCGGCCAGCCATGGCACCGCCACCGCCAGCGGCACCAGCATCACCTACACCCCGACCGCCGGTTTCTCCGGTTCCGACAGTTTTACCTACACCGCCACCAACACCAGCGGCACTTCCAGCCCGGCCACGGTGACCATCACCGTCACCCCGCCGACCCTGGCGATAACGCCGACGACACTGCCCGACGGCACCCAGGGCGCAGCCTACAGCCAGACCCTGAGCGCCACCGGCGGTACCGCGCCGTACACCTACGCGATCAGCGCCGGCAGCTTGCCGGCCGGCCTGAGCCTGAACACCAGCACAGGCGTGATCAGCGGCACGCCGAGCGCCAGTGGCACCAACAACCTGACCGTCACCGCCACTGACGCCAACAGCGCCACCGGTTCCCGCGCCTACAGCCTGGTGATCAACGGCCTGGCGCCGGTTGCCAACGCCGTCAGCGCCACCGTCGCGGCCAACAGCAGCGCCAACCCGATCACTTTGAACATCACCGGCGGCGCGGCCACCAGTGTCGCCGTGGCCAGTGCAGCCAGCCATGGCACCGCCACCGCCAGCGGCACCAGCATCACCTACACCCCGACCGCCGGGTTCTCCGGTTCCGACAGTTTCACCTACACCGCCACCAACGCCAGTGGCACTTCCAGCCCGGCCACGGTGACCATCACCGTCAGCGCGCCGAGCATCGTCCTCAGCCCCGGCTCCCTGAGCAACGGCACTGTCGGCACGGCCTACAACGCCAGTCTCAGTGCTTCCGGTGGCGCCGCGCCCTACAGCTACACCATCACCGCCGGCACTCTGCCAACCGGCCTGAGCCTGAACACCAGCACCGGTGCAATCAGCGGCACGCCGAGCGCCAGCGGCACCTTCAACCTGACCATC
PROTEIN sequence
Length: 557
MRTPLTAPGNWLTRPLISLFLLLVMLSMSSQAMAVAPVITNPASGSTLPTIAVGQSMSITISSVGGTMPLDRWVECDANDPDYDGVTPCLPPGLILDASPGSATTVLHGTPTTAGNYTFSITLNDGNNDGGVATYNLLVTSSATPTLTSVTPNTGSTAGATSVTLTGTNFTGATAVSFGGTAATGYIVNNATTITATTPAHAAGAVNVAVTTPGGSATLTNGYTYAVPAPTVGPVSATVAANSSANPITLSLSGGAATSVAVASAASHGTATASGTSITYTPTAGFSGSDSFTYTATNTSGTSSPATVTITVTPPTLAITPTTLPDGTQGAAYSQTLSATGGTAPYTYAISAGSLPAGLSLNTSTGVISGTPSASGTNNLTVTATDANSATGSRAYSLVINGLAPVANAVSATVAANSSANPITLNITGGAATSVAVASAASHGTATASGTSITYTPTAGFSGSDSFTYTATNASGTSSPATVTITVSAPSIVLSPGSLSNGTVGTAYNASLSASGGAAPYSYTITAGTLPTGLSLNTSTGAISGTPSASGTFNLTI