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S16_scaffold_399_curated_28

Organism: S16_RifleBG_Stenotrophomonas_66_10_curated

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 MC: 1 ASCG 14 / 38 MC: 1
Location: comp(22722..23333)

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01080, ECO:0000256|SAAS:SAAS00043744}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01080, ECO:0000256|SAAS:SAAS00043720};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA pseudouridylate synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA-uridine isomerase {ECO:0000256|HAMAP-Rule:MF_01080}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 157.0
  • Bit_score: 304
  • Evalue 9.00e-80
tRNA pseudouridine synthase B n=1 Tax=Stenotrophomonas sp. SKA14 RepID=B8L4J3_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 93.0
  • Coverage: 157.0
  • Bit_score: 287
  • Evalue 1.10e-74
tRNA pseudouridine synthase B similarity KEGG
DB: KEGG
  • Identity: 93.6
  • Coverage: 157.0
  • Bit_score: 287
  • Evalue 3.00e-75

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Taxonomy

Stenotrophomonas sp. RIT309 → Stenotrophomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 612
ATGACCCGAATTCAGTTCCGCCGCCTGGATGGCATCCTGCTGCTCGACAAGCCGACCGGCATGAGCTCCAACGCCGCGCTGCAGGTCGCCCGTCGCCTGTTCCGTGCAGAGAAGGGCGGCCACACCGGCAGCCTCGACCCGCTGGCCACCGGCCTGTTGCCGCTGTGCTTCGGCGAGGCGACCAAGATTGCCGGCCTGCTGCTGGGCTCGGCCAAGGCCTACGACGCCGAGATCGTGCTGGGCCAGACCACCGATACCGACGACGCCGAGGGCCAGGTGCTGCTCGAGCGGCCGGTGCCCGTGATCAGCGCCGAGGCCCTGCAGGCGGCGATCGCGCCGCTGCTTGGCGACATCCTGCAGCGTGCGCCGATCTATTCCGCGCTCAAGCAGGGCGGGGAGCCGCTGTATGTGAAGGCCCGCCGTGGCGACGCCATCGAGGCGCCCGAGCGCCAAGTCAAGGTCCACGCCATCGnnnnnnnnnnnnnnnnnnnATCCGCAGTCTGGCCCGTGACCTGGGTGAAACGCTGGGCTGTGGCGCGCACATCAGCGCCCTGCGGCGCCTGTGGGTGGAGCCGTTCCACGAACCGGCGATGGTCACCCTGGAGCAGCTGA
PROTEIN sequence
Length: 204
MTRIQFRRLDGILLLDKPTGMSSNAALQVARRLFRAEKGGHTGSLDPLATGLLPLCFGEATKIAGLLLGSAKAYDAEIVLGQTTDTDDAEGQVLLERPVPVISAEALQAAIAPLLGDILQRAPIYSALKQGGEPLYVKARRGDAIEAPERQVKVHAIXXXXXXXSAVWPVTWVKRWAVARTSAPCGACGWSRSTNRRWSPWSS*