ggKbase home page

S16_scaffold_834_curated_9

Organism: S16_RifleBG_Stenotrophomonas_66_10_curated

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 MC: 1 ASCG 14 / 38 MC: 1
Location: comp(7266..7532)

Top 3 Functional Annotations

Value Algorithm Source
Inner membrane protein forms channel for type IV secretion of T-DNA complex (VirB3) n=2 Tax=Stenotrophomonas maltophilia RepID=I0KQ25_STEMA similarity UNIREF
DB: UNIREF100
  • Identity: 97.7
  • Coverage: 88.0
  • Bit_score: 181
  • Evalue 2.10e-43
Type IV secretory pathway VirB3 family protein {ECO:0000313|EMBL:EZP45448.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 88.0
  • Bit_score: 184
  • Evalue 3.40e-44
inner membrane protein forms channel for type IV secretion of T-DNA complex (VirB3) similarity KEGG
DB: KEGG
  • Identity: 97.7
  • Coverage: 88.0
  • Bit_score: 181
  • Evalue 5.90e-44

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Stenotrophomonas sp. RIT309 → Stenotrophomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 267
ATGTTCCTGGGCGTGCCTTACCTGCCATTTTTCATGGTGGCAGGTGGGTTGTTGCTCCTCAGTATGTATACCAACTTCTGGTTCCTGCTGACCATCCCTGTGGCCGTTTTCATCATGCGTCAAATGGCCAAGCGTGACGAGATGATCTTCCGGTTGCTGGGGCTGCGGCTGATGTTCAAGCTACGGGTCCGCAATGTGCAGGAACACGATGGTATGTGGGTGTTCAACCCGAATCACTATCGCAACAAGCCAGCCCGAATGGATTGA
PROTEIN sequence
Length: 89
MFLGVPYLPFFMVAGGLLLLSMYTNFWFLLTIPVAVFIMRQMAKRDEMIFRLLGLRLMFKLRVRNVQEHDGMWVFNPNHYRNKPARMD*