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S18_scaffold_45_curated_16

Organism: S18_Pseudomonas_mendocina_63_22_curated

near complete RP 52 / 55 MC: 2 BSCG 51 / 51 MC: 2 ASCG 14 / 38
Location: 23824..24867

Top 3 Functional Annotations

Value Algorithm Source
Lipopolysaccharide heptosyltransferase II n=1 Tax=Pseudomonas mendocina (strain NK-01) RepID=F4DNC3_PSEMN similarity UNIREF
DB: UNIREF100
  • Identity: 96.3
  • Coverage: 347.0
  • Bit_score: 683
  • Evalue 8.60e-194
  • rbh
ADP-heptose--LPS heptosyltransferase {ECO:0000313|EMBL:KFJ92207.1}; TaxID=633150 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. 1-7.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 97.4
  • Coverage: 347.0
  • Bit_score: 689
  • Evalue 2.20e-195
lipopolysaccharide heptosyltransferase II similarity KEGG
DB: KEGG
  • Identity: 96.3
  • Coverage: 347.0
  • Bit_score: 683
  • Evalue 2.40e-194
  • rbh

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Taxonomy

Pseudomonas sp. 1-7 → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1044
ATGAAGATACTTATCGTTGGGCCAAGCTGGGTGGGCGACATGGTGATGGCGCAGACGCTGTTCCAGTGCCTGAAACAGCGCCATCCTGCGTGCGAGATCGACGTGCTGGCGCCGGACTGGAGCCGGCCGATCCTCGAGCGCATGCCCGAAGTGCGCGCCGCGCTCAGTCTGCCGCTCGGCCATGGCGTCCTCGATCTGGCCACGCGCCGGCGTATCGGCAAGTCGCTGGCCGGTCAGTACGATCAGGCCATCCTGCTGCCCAACTCGCTCAAATCCGCCCTGGTGCCCTGGTTTGCCGGCATTCCCAAGCGCACCGGCTGGAAGGGCGAGATGCGCTATGGCCTGCTCAACGATATCCGCATGCTGGACAAAGAACGCTACCCGCTGATGATCGAGCGTTTCATGGCGCTGGCCTATGAGCCCGGTGCTCTGTTGCCGCAGCCCTATCCGCAGCCGCGTTTGCAGATCGATGAGTCGAGCCGTGACGCCGCTCTGAGCAAATTTGGCCTGCAGCTGGACCGTCCGGTGCTGGCGCTGTGCCCCGGCGCCGAGTTCGGCGAGGCCAAGCGCTGGCCTGCCGAGCACTACGCCAAGGTCGCCGAAGTGAAGATCCGTGAGGGCTGGCAGGTCTGGCTGTTCGGCTCGAAGAACGACCATGCCGGTGGTGAGGACATCCGCTTGCGCCTGATTCCGGGCCTGCGCGAGGAGGTCAGCAACCTGTCCGGACAGACCAGTCTGGCCGAGGCCATCGACCTGATGTCGGCGGCCACTGCCGTGGTGTCCAATGACTCGGGGCTGATGCACGTGGCGGCGGCACTGAATCGTCCGCTGGTAGCAGTCTATGGTTCCACTTCGCCGGGTTTCACCCCGCCGTTGGCCGATCAGGTCGAGATCGTTCGCCTGGGCCTGGAGTGCAGCCCCTGCTTCGAGCGCACCTGCCGCTTCGGTCACTACAACTGCCTGCGCGAGCTCAAGCCAAGGCCGGTGATCGAGGCGCTGGATCGACTGGTCGGTGAGCTTCTGACCCTGGTCGAGGGTGACTGA
PROTEIN sequence
Length: 348
MKILIVGPSWVGDMVMAQTLFQCLKQRHPACEIDVLAPDWSRPILERMPEVRAALSLPLGHGVLDLATRRRIGKSLAGQYDQAILLPNSLKSALVPWFAGIPKRTGWKGEMRYGLLNDIRMLDKERYPLMIERFMALAYEPGALLPQPYPQPRLQIDESSRDAALSKFGLQLDRPVLALCPGAEFGEAKRWPAEHYAKVAEVKIREGWQVWLFGSKNDHAGGEDIRLRLIPGLREEVSNLSGQTSLAEAIDLMSAATAVVSNDSGLMHVAAALNRPLVAVYGSTSPGFTPPLADQVEIVRLGLECSPCFERTCRFGHYNCLRELKPRPVIEALDRLVGELLTLVEGD*