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S18_scaffold_45_curated_17

Organism: S18_Pseudomonas_mendocina_63_22_curated

near complete RP 52 / 55 MC: 2 BSCG 51 / 51 MC: 2 ASCG 14 / 38
Location: 24869..25873

Top 3 Functional Annotations

Value Algorithm Source
ADP-heptose:LPS heptosyl transferase n=1 Tax=Pseudomonas mendocina EGD-AQ5 RepID=U1T4D0_PSEME similarity UNIREF
DB: UNIREF100
  • Identity: 97.0
  • Coverage: 334.0
  • Bit_score: 662
  • Evalue 1.50e-187
  • rbh
ADP-heptose:LPS heptosyl transferase {ECO:0000313|EMBL:ERH52969.1}; TaxID=1390370 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mendocina EGD-AQ5.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 97.0
  • Coverage: 334.0
  • Bit_score: 662
  • Evalue 2.10e-187
lipopolysaccharide heptosyltransferase I similarity KEGG
DB: KEGG
  • Identity: 97.6
  • Coverage: 332.0
  • Bit_score: 661
  • Evalue 7.30e-188
  • rbh

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Taxonomy

Pseudomonas mendocina → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1005
TTGCGGGTGCTGATCATCAAGACCTCGTCGCTGGGCGACGTGGTGCATACCCTGCCGGCACTGACCGATGCTGCGCGTGCCATTCCCGGCATCCGCTTCGACTGGGTGGTGGAAGAAGGCTTCGCCGAGATTCCCGCCTGGCATCCGGCGGTGTCCCAGGTGATTCCGGTGGCCATCCGCCGCTGGCGCAAGCACCCGCTGCGCACCTGGCGCAGTGGCGAATGGGTGCGTTTCAAGCAGCGTCTGCGCGAAACCCGCTACGACCTGGTTATCGACGCCCAGGGCCTGCTCAAGAGCGCCTGGCTGGCGCGTTACGTGTCGGCGCCGGTGGCCGGTCTGGATCGCGATTCGGCGCGTGAGCCGCTGGCCAGTCGCTTCTATGATCGCCGCTATGCGGTGGCCAAGGATCAGCACGCGCTGGAGCGCGTGCGCCAGTTGTTCGCCAAGGCTTTGGGTTATTCGCTGCCGTCCGGTAGCGGCGACTACGGCCTTAACCGCGCAGCGATGATGGACGCTACCGCGCAGCCTTACCTGGTGTTCCTGCATGGCACCACCTGGGCCAGCAAGCACTGGCCGGAAGCCGACTGGCGTGCGCTGGCCGAGCGTATGGACGAACTGGGCTGGGCCGTACGCCTGCCCTGGGGCAACGAGCACGAGAAAGCGCGTGCCGAGCGCATCGCTGCCGGCCTGACGCACGCCGCTGTGCTGCCGAAGCTGAACCTGGCCGGCGTAGCCAAGGTGATCGCCGGCGCCAGCGCCTGCGTCTCGGTCGACACCGGGCTCGGCCACTTGGCCGCGGCGCTGGATGTACCGAACATTTCCCTCTACGGCCCGACCCTGCCCGGCAAGGTGGGCGCCTACGGTCGTAGCCAGATTCACCTGTGTGCCAGCGGCCCGGGCGCCGGCAGCGGTGACCGTGACAAGCCCTGCTTCGATGGCCTCGGCGCCGAACGTGTCGGCCTGGAACTGGAGGCGCTGCTGCTGGCGCCTCCCGGCACCCTTTAA
PROTEIN sequence
Length: 335
LRVLIIKTSSLGDVVHTLPALTDAARAIPGIRFDWVVEEGFAEIPAWHPAVSQVIPVAIRRWRKHPLRTWRSGEWVRFKQRLRETRYDLVIDAQGLLKSAWLARYVSAPVAGLDRDSAREPLASRFYDRRYAVAKDQHALERVRQLFAKALGYSLPSGSGDYGLNRAAMMDATAQPYLVFLHGTTWASKHWPEADWRALAERMDELGWAVRLPWGNEHEKARAERIAAGLTHAAVLPKLNLAGVAKVIAGASACVSVDTGLGHLAAALDVPNISLYGPTLPGKVGAYGRSQIHLCASGPGAGSGDRDKPCFDGLGAERVGLELEALLLAPPGTL*