ggKbase home page

S18_scaffold_180_curated_14

Organism: S18_Pseudomonas_mendocina_63_22_curated

near complete RP 52 / 55 MC: 2 BSCG 51 / 51 MC: 2 ASCG 14 / 38
Location: comp(11981..13414)

Top 3 Functional Annotations

Value Algorithm Source
Exodeoxyribonuclease I {ECO:0000256|PIRNR:PIRNR000977}; EC=3.1.11.1 {ECO:0000256|PIRNR:PIRNR000977};; TaxID=1001585 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mendocina (strain NK-01).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 91.8
  • Coverage: 477.0
  • Bit_score: 912
  • Evalue 1.70e-262
exonuclease I n=1 Tax=Pseudomonas mendocina RepID=UPI00038175DD similarity UNIREF
DB: UNIREF100
  • Identity: 92.7
  • Coverage: 477.0
  • Bit_score: 916
  • Evalue 8.30e-264
  • rbh
exonuclease I similarity KEGG
DB: KEGG
  • Identity: 91.8
  • Coverage: 477.0
  • Bit_score: 912
  • Evalue 3.40e-263
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pseudomonas mendocina → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1434
ATGACTTCCAGCATCTTCTGGTACGACTACGAGACCACCGGTATCAATCCGCGTTGCGATCGTCCGCTGCAGGTGGCGGGCATCCGTACCGACGACGCGCTGAACGAGATCGGCGAGCCGCTGAACATCTATTGCAGGCCCAGCGACGATATTCTGCCGCACCCGGCGGCCTGCCTGGTGACCGGCATCGATCCGCAGCGCCTGCAGCAGCTGGGCCTGGATGAGGGCGAGTTCGTCACCCGCGTGCATGCCGCGCTGTCGACGCCCGGTACCTGCGGCGCCGGCTACAACAGCCTGCGTTTCGATGACGAGGTGACGCGTTACAGCCTCTATCGCAACTTTTTCGACCCCTATGCGCGCGAATGGCAGGGCGGTAACAGTCGCTGGGACCTCATCGATCTGGTGCGTACCGCCTACGCGCTGCGGCCCGAGGGCATCGAGTGGCCCGAAGACGACGGGCGCGTCTCGCTCAAACTGGAGCGGCTGACCCAGGCCAACGGCATCGATCACGGCCAGGCGCACGATGCGCTGTCCGACGTGCGCGCGACCATCGGCCTGGCACGTCTGCTGCGCGAGCGACAGCCACGGCTCTACGACTTTCTCTATCAGCTGCGCAGCAAGCAGCGGGTCATGGATCAGATTCGCCTGTTGCAGCCTGTGCTGCACGTTTCCGGGCGCTTCTCCGCGGCGCGCCACTACCTGGCGCCCGTGCTACCGCTGGCATGGCACCCGCGCAACCGTAACGCGCTGATCGTCTGCGACCTGCAGGCCGATCCCTCGCCCTTGCTGGAACTGGACGCCGATACCCTGCGCAGCCGTCTCTACACGCGCCGTGAGGAACTCGCCGAGGGAGAGATGCCGGTGCCGTTGAAGTTGCTGCATATCAATCGCTGTCCGGTGGTGGCGCCGTTGTCGGTGCTGCGCGAAACGGATCGGCAGCGCCTGCAGCTGGACTGGTCGATCTGCGAGCGAAATGCCGAGGTGCTGAAGAATGCGCAGGCGCTTTGGCAGGACAAGCTTCCTGCCGCCTACCGCGAAGAATCCTTCGAGGGTAGCAGCGACCCAGAGCAACAGCTCTACGACGGCTTTATCGGTGATCGTGATCGACGTTTGTGCGAGCAGGTGCGTAGCGCCCAACCTCAGGCATTGGCCAACGACAAATGGCCTTTCGATGATGCGCGACTACCGGAGTTATTGTTTCGTTATCGCGCACGCAACTTTCCTGACAGTTTGTCGCCTGGCGAACGTCAGCGCTGGATGGAGTTCTGTCGGCAGCGGCTGAGCGATCCGCAGTTCGGTGCCCCTAATACGCTTGGGCAATTTCGCGCAGCGCTGGAGCAATTGCGCGCTGATTGCAGTGCGCCGCAATTGCAACTTCTGCAGCAGTGGCAGGCCTATGTAGATGAACTGCAGGCACGTTTTGCCGTGAATTGA
PROTEIN sequence
Length: 478
MTSSIFWYDYETTGINPRCDRPLQVAGIRTDDALNEIGEPLNIYCRPSDDILPHPAACLVTGIDPQRLQQLGLDEGEFVTRVHAALSTPGTCGAGYNSLRFDDEVTRYSLYRNFFDPYAREWQGGNSRWDLIDLVRTAYALRPEGIEWPEDDGRVSLKLERLTQANGIDHGQAHDALSDVRATIGLARLLRERQPRLYDFLYQLRSKQRVMDQIRLLQPVLHVSGRFSAARHYLAPVLPLAWHPRNRNALIVCDLQADPSPLLELDADTLRSRLYTRREELAEGEMPVPLKLLHINRCPVVAPLSVLRETDRQRLQLDWSICERNAEVLKNAQALWQDKLPAAYREESFEGSSDPEQQLYDGFIGDRDRRLCEQVRSAQPQALANDKWPFDDARLPELLFRYRARNFPDSLSPGERQRWMEFCRQRLSDPQFGAPNTLGQFRAALEQLRADCSAPQLQLLQQWQAYVDELQARFAVN*