ggKbase home page

S18_scaffold_346_curated_11

Organism: S18_Pseudomonas_mendocina_63_22_curated

near complete RP 52 / 55 MC: 2 BSCG 51 / 51 MC: 2 ASCG 14 / 38
Location: 12046..13263

Top 3 Functional Annotations

Value Algorithm Source
general secretion pathway protein F n=1 Tax=Pseudomonas mendocina RepID=UPI00035E45E4 similarity UNIREF
DB: UNIREF100
  • Identity: 97.8
  • Coverage: 405.0
  • Bit_score: 747
  • Evalue 4.40e-213
  • rbh
General secretion pathway protein GspF {ECO:0000313|EMBL:EZH79264.1}; TaxID=1453503 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas oleovorans/pseudoalcaligenes group.;" source="Pseudomonas pseudoalcaligenes AD6.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 97.5
  • Coverage: 405.0
  • Bit_score: 745
  • Evalue 2.30e-212
general secretion pathway protein F similarity KEGG
DB: KEGG
  • Identity: 97.0
  • Coverage: 405.0
  • Bit_score: 740
  • Evalue 2.00e-211
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pseudomonas pseudoalcaligenes → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1218
ATGGCGGCCTTTGAATATATCGCCCTGGATGGGCGCGGCCGCCAGCAAAAAGGCGTGCTGGAGGCCGATAGCGCGCGTCAGGTGCGCCAGCTGTTGCGCGAGCGCCAGTTGGCGCCGTTGGAGGTCAAGGCCACCCGTAGCCGCGAGCAGGGCAGTGGCGGCGCTCGCCTGGGCTTTGCCCGTGGTCTTTCGGCGCGTGATCTGGCGCTGGTCACTCGCCAGTTGGCGACGCTGATCCAGGCGGCGCTGCCCATCGAGGAGGCACTGCGCGCCGCTGCCGCGCAATCCACCAGTTCGCGTATCCAGGGCATGTTGCTGGCGGTGCGCGCTCGCGTGCTGGAGGGGCACAGCCTGGCCGGCAGTCTCAAGGAATTCCCGGCCGCCTTCCCCGAGCTTTACCGCGCCACGGTGGCGGCGGGTGAGCACGCCGGTCACCTCGGCCCAGTGCTGGAGCAATTGGCCGACTACACCGAGCAGCGCCAGCAGTCGCGGCAAAAGGTGCAGCTGGCCTTGCTCTATCCGGTGATTCTGATGTGCGCCTCGCTGCTGATCGTCGGTTTCCTGCTTGGCTACGTGGTGCCGGATGTGGTCAAGGTGTTCGTCGATTCCGGGCAGACCCTGCCGGCCCTGACCCGCGGTCTGATCGCCTTGAGCGACTGGGTCAAGGCCTGGGCGCTGGTTGCGCTGGTCGCGCTGATATTGGCGGTGATCGCCTTGCGCGCAGCGCTGCGTGATGAGGCCTTCCGCCTGCGCTGGCATCGCTTTCTCCTGCGCCTGCCGCTGATCGGCCGGCTGGGCCGCGCCACCGATTGCGCGCGCTTCGCCTCGACCCTGGCGATCCTTACCCGCAGTGGCGTGCCGCTGGTCGAGGCGTTGGCAATCGCCGGCGAGGTGATCGGCAACCGGGTGATCCGTGGCGAGGTGCTGGTGGCGGCGCAGAAGGTGCGCGAGGGCGGCAGCCTGACCCGTTCGCTGGAGGCCACCGGGCAGTTCCCGCCGATGATGCTGCACATGATCGCCAGCGGAGAACGCTCCGGCGAGCTGGATCAGATGTTGGCGCGCACGGCGAAGAATCAGGAGAACGATCTGAGCGCGCAGATCGCCTTGCTGGTCGGCTTGTTCGAGCCGTTCATGCTGGTATTCATGGGCGCAGTGGTGCTGGTGATCGTGCTGGCCATCCTGTTGCCGATTCTTTCTTTGAACCAAATGGTGGGGTAA
PROTEIN sequence
Length: 406
MAAFEYIALDGRGRQQKGVLEADSARQVRQLLRERQLAPLEVKATRSREQGSGGARLGFARGLSARDLALVTRQLATLIQAALPIEEALRAAAAQSTSSRIQGMLLAVRARVLEGHSLAGSLKEFPAAFPELYRATVAAGEHAGHLGPVLEQLADYTEQRQQSRQKVQLALLYPVILMCASLLIVGFLLGYVVPDVVKVFVDSGQTLPALTRGLIALSDWVKAWALVALVALILAVIALRAALRDEAFRLRWHRFLLRLPLIGRLGRATDCARFASTLAILTRSGVPLVEALAIAGEVIGNRVIRGEVLVAAQKVREGGSLTRSLEATGQFPPMMLHMIASGERSGELDQMLARTAKNQENDLSAQIALLVGLFEPFMLVFMGAVVLVIVLAILLPILSLNQMVG*