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S18_scaffold_8_curated_1

Organism: S18_Pseudomonas_mendocina_63_22_curated

near complete RP 52 / 55 MC: 2 BSCG 51 / 51 MC: 2 ASCG 14 / 38
Location: comp(1..645)

Top 3 Functional Annotations

Value Algorithm Source
LysR family transcriptional regulator n=2 Tax=Pseudomonas RepID=J7UNJ4_PSEME similarity UNIREF
DB: UNIREF100
  • Identity: 99.1
  • Coverage: 215.0
  • Bit_score: 419
  • Evalue 1.90e-114
  • rbh
LysR family transcriptional regulator {ECO:0000313|EMBL:ERH53581.1}; TaxID=1390370 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mendocina EGD-AQ5.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.6
  • Coverage: 215.0
  • Bit_score: 417
  • Evalue 5.90e-114
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 211.0
  • Bit_score: 415
  • Evalue 7.70e-114
  • rbh

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Taxonomy

Pseudomonas mendocina → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 645
ATGGGTGCCGGTATGCTCGATCCCGTGCTGTTACGCAGTTTTCTCGCCGTGGTGCAGACCGGCGGCTTCACCCGCGCTGCGGCCAGCCTGCACCTGACCCAGTCCACTGTCAGCCAGCAGGTGCGGCGTCTGGAGGAGCAGCTTGGCGCCGAGCTGCTCGACCGCAGCGGCCGCTACGTGGTGACCACCACCGAGGGCGAGCGCCTGCTGGGTTACGCCAATCGCATCGTCGCGCTGATGGACGAAGCCATGCTGGCGCTGGGGCAAAGTGCGGTGGAGGGCGAGGTGCGCCTGGGCGTGCCGGACGATTTCGCCGCCAACAGCCTGACTCCCTATCTGGCCGATTTCGCCGATGCCCATCCGGGTATCCGCCTGGAGATCACCAGTGGCCTCAGTCACGACGTGTGGCGTGCGTTCAACGCCGGCGAGCTGGATCTGGCGCTGATCAAGCAGCGCGCCGGCAGCGCCAAGGGCCTGGCCAGCTGGGCCGAGCCGCTGGCCTGGCTCGACAGTCGTGCGCGACCGGTGCTGGCGCGCAATCCGGTGCCGCTGGCGGTGTTTCCGCCCAACGGCCTGTATCGCCTGGAGATGACCCATGCGCTGGATGCCATGGGCAAACCCTGGCGCATCGCCTATGTCAGCAGC
PROTEIN sequence
Length: 215
MGAGMLDPVLLRSFLAVVQTGGFTRAAASLHLTQSTVSQQVRRLEEQLGAELLDRSGRYVVTTTEGERLLGYANRIVALMDEAMLALGQSAVEGEVRLGVPDDFAANSLTPYLADFADAHPGIRLEITSGLSHDVWRAFNAGELDLALIKQRAGSAKGLASWAEPLAWLDSRARPVLARNPVPLAVFPPNGLYRLEMTHALDAMGKPWRIAYVSS