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S18_scaffold_303_curated_3

Organism: S18_Pseudomonas_mendocina_63_22_curated

near complete RP 52 / 55 MC: 2 BSCG 51 / 51 MC: 2 ASCG 14 / 38
Location: comp(4937..6022)

Top 3 Functional Annotations

Value Algorithm Source
RND family efflux transporter MFP subunit n=1 Tax=Pseudomonas mendocina (strain NK-01) RepID=F4DMW3_PSEMN similarity UNIREF
DB: UNIREF100
  • Identity: 97.5
  • Coverage: 358.0
  • Bit_score: 677
  • Evalue 3.80e-192
  • rbh
RND family efflux transporter MFP subunit similarity KEGG
DB: KEGG
  • Identity: 97.5
  • Coverage: 358.0
  • Bit_score: 677
  • Evalue 1.10e-192
  • rbh
RND family efflux transporter MFP subunit {ECO:0000313|EMBL:AEB59196.1}; TaxID=1001585 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mendocina (strain NK-01).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 97.5
  • Coverage: 358.0
  • Bit_score: 677
  • Evalue 5.30e-192

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Taxonomy

Pseudomonas mendocina → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1086
ATGTTCGCGCAATTCAGCAAACGTCCCTGGATCATCGCCGTCGTCATCGCCATCGTGCTGCTGCTCTGGCTGCTCAGCGGCGACCGCTTCGTCGCACGCGACGAGGTACAGGCCGAGCCCGATAAACCGGCCACGAGCGCCGAACTGGCACGGGTGGAGGTGACATGGCTGGAAGCGCAGCCCATGCAGCGCCAGCATGTGGTGCAGGGCCAGATCGAGGCCTGGCGCCGCGTTGAACTGCGCGCCCAGGTCAGCGGCAGCGTGCAGAACCTGGATCAGGACAAGGGCAACCGCGTCGCCGCCGATCAGTTGCTGCTCAGCCTCTCGCCGGACGACCGCCCGGCGCAGGTCGCACGCAGCGAGGCCGATGTCCGGCAACGACAAAGCGACGTCACCGCGGCCAAACGCCTGCGTGAGCGCAGCCTGGTCTCGGCCAACGAACTGATGCGCCTGGAAAGCGAGCTGGCCAAGGCACGCGCCGAACTCGACAGCGCCCGCCTGCAGCAACGCAACACCAAGATCAGGGCGCCGTTCGCCGGCATCTACGACCAGCGCATGGTCGAACTGGGAGACTTCGTCCAACCCGGCCAGAGCCTGCTGACCCTGGTAGACATCGACCGCCTCAAGGTCAGCGCGCAGATCGCCCAGCAACAGGTGACCCACCTCGAGCTGGGCCAGCCGGTGAAGGTGGAACTGCTCGACGGCCGCACGCTGCAGGGCGAACTGCACTTCATCGCCGCCGCAGCCGACCCGGGTTCGCGCAGCTTCCGCATCGAGGTCAAGGTGGACAACCCGGACGGCTTGCGCCTGGCCGGGGCCAGCGCCACGCTGCATATCCAGACCGGCGAAGCCATGGCTCATCGCCTGTCCCCTGCCCTGCTCAGCCTGGACGAAAACGGCCGCCACGGCGTCAAGTGGGTCAACGATGCGCAGCGCGTGGAGTTCACCCCGGTGGATCTGATCAGCGTCGACAACCAGGGCGCCTGGGTCAGCGGCCTGCCGCCGAAGGTCGCGCTGATCACCCTCGGCCAGGGTTTCGTCCAGCCCGGCCAGCAGGTGCGCACGCAACTTGCAGAGGGCAGCTGA
PROTEIN sequence
Length: 362
MFAQFSKRPWIIAVVIAIVLLLWLLSGDRFVARDEVQAEPDKPATSAELARVEVTWLEAQPMQRQHVVQGQIEAWRRVELRAQVSGSVQNLDQDKGNRVAADQLLLSLSPDDRPAQVARSEADVRQRQSDVTAAKRLRERSLVSANELMRLESELAKARAELDSARLQQRNTKIRAPFAGIYDQRMVELGDFVQPGQSLLTLVDIDRLKVSAQIAQQQVTHLELGQPVKVELLDGRTLQGELHFIAAAADPGSRSFRIEVKVDNPDGLRLAGASATLHIQTGEAMAHRLSPALLSLDENGRHGVKWVNDAQRVEFTPVDLISVDNQGAWVSGLPPKVALITLGQGFVQPGQQVRTQLAEGS*