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S18_scaffold_60_curated_11

Organism: S18_Pseudomonas_mendocina_63_22_curated

near complete RP 52 / 55 MC: 2 BSCG 51 / 51 MC: 2 ASCG 14 / 38
Location: comp(8682..9581)

Top 3 Functional Annotations

Value Algorithm Source
LysR family transcriptional regulator n=1 Tax=Pseudomonas mendocina RepID=UPI00036D19BB similarity UNIREF
DB: UNIREF100
  • Identity: 94.0
  • Coverage: 299.0
  • Bit_score: 563
  • Evalue 6.60e-158
  • rbh
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 92.6
  • Coverage: 299.0
  • Bit_score: 555
  • Evalue 6.60e-156
  • rbh
Transcriptional regulator, LysR family {ECO:0000313|EMBL:ABP85912.1}; TaxID=399739 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mendocina (strain ymp).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 92.6
  • Coverage: 299.0
  • Bit_score: 555
  • Evalue 3.30e-155

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Taxonomy

Pseudomonas mendocina → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 900
ATGAGCCGGCGCAGGCTACCACCGCTATCTGCCTTGCGTGCCTTCGAGGCGGCGGCTCGTCATGAGAGCGCCAAGCAAGCCGCGGAAGAACTCTCCGTCACCGCCACGGCGATCAGTCACCAGATCCGTGCGCTGGAGGAATCCCTCGGCCTTGCACTGTTCGTACGCAAGCCTCGTCAGCTGGAACTGACCATGGCCGGGCGCGAGCTGCAGCAAGTGCTGGAAAGCGCCTTCGACAGCATCGGCGCTGCGGTCGAGCGGCTCAGCGCCGCACCGCGCCGGCATGCGGTCACCCTCAGCACCACGCCCGCGGTGGCGGTGCGCTGGCTGCTGTCCTGGGTCTGCCTGCTGCGCGATTCCCACCCGGATATCGACCTGCGCATTCATGCCTCGCATGAGCCGGTGGCGCTCGACGGCGTCACCGCCGATATCGCCATTCGCTACGGCGATGGCCGCTGGCCAGGGCTGGTTGCGGAGAAACTCTTCGACAACACCTTCGTACCCGCCTGCAGCCCGCTACTGGAGTTGCACGATGCCGCCGATCTGCCCAGGCATGCGCTGATTCACTTTCGCAACCAGGCGGCGATTTCCTCGCCCATCGATTGGGCGGTCTGGCAGAAGCAGGCCCAGATACCGGGGCTGGATGTCGGGGCCGGGCTGGTGTTCTCCGACGAGACTCACGCCGTCTCGGCCGCCGTCGGCGCTCAGGGCGTGGCGCTGATGAGCCGGCAACTGATCGAGGACGAGTTGACGGCGGGGCGCCTGATGCAGCCCTTCGGGCCGGAGCTGGAAGGCAAGCCGTTCTTTCTGGTGTACCCCGAAAGCCGCCGCAATGACCCGAGCATTCAGGCCGTGCGCGAGTGGATCCTGACGGTGCCGGGTGGTTTGTGTCCGGTGTAG
PROTEIN sequence
Length: 300
MSRRRLPPLSALRAFEAAARHESAKQAAEELSVTATAISHQIRALEESLGLALFVRKPRQLELTMAGRELQQVLESAFDSIGAAVERLSAAPRRHAVTLSTTPAVAVRWLLSWVCLLRDSHPDIDLRIHASHEPVALDGVTADIAIRYGDGRWPGLVAEKLFDNTFVPACSPLLELHDAADLPRHALIHFRNQAAISSPIDWAVWQKQAQIPGLDVGAGLVFSDETHAVSAAVGAQGVALMSRQLIEDELTAGRLMQPFGPELEGKPFFLVYPESRRNDPSIQAVREWILTVPGGLCPV*