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S18_scaffold_331_curated_14

Organism: S18_Pseudomonas_mendocina_63_22_curated

near complete RP 52 / 55 MC: 2 BSCG 51 / 51 MC: 2 ASCG 14 / 38
Location: comp(10328..11587)

Top 3 Functional Annotations

Value Algorithm Source
porin n=1 Tax=Pseudomonas alcaliphila RepID=UPI0002E66F02 similarity UNIREF
DB: UNIREF100
  • Identity: 96.2
  • Coverage: 419.0
  • Bit_score: 829
  • Evalue 1.20e-237
  • rbh
Porin {ECO:0000313|EMBL:ERH53594.1}; TaxID=1390370 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mendocina EGD-AQ5.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 86.3
  • Coverage: 423.0
  • Bit_score: 745
  • Evalue 3.10e-212
outer membrane porin similarity KEGG
DB: KEGG
  • Identity: 85.2
  • Coverage: 425.0
  • Bit_score: 741
  • Evalue 9.10e-212
  • rbh

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Taxonomy

Pseudomonas mendocina → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1260
ATGACCGCACGCAACATCATCCCATTGGCCCTGCTCGGCAGCACGGCTCTGGCCCTGGTTATGCCGACTGCCACGCACGCTGCCGGCTTCGTCGAAGACGCCAAAGTCACCCTCGGCTTGCGCAACTACTACTTCAATCGCAATTACCTCAATGGTACCGATCCCCTTATCCGCGGTGAGCGCCAGGGCCAGGCCGAAGGCTGGACCCAGAGCTTCATCCTCGATGCACGCTCCGGCTACACCCAGGGCACCGTTGGCTTCGGCCTCGACGTACTCGGCCTGTACAGCATCAAGCTGGATGGCAACCGTGGCGCCGCCAACACCCAGCTGATGCCGATTCAAGATGACGGTGAAGCAGCCGATCAATACGGCCGTACTGCCGTGGCCGCCAAGGCGAAAATCTCCAAGACCGAACTGAAAGTCGGTGAGTGGTTCGCCGTGCTGCCGATCCTGCGTGCTGACGACGGTCGCTCGCTGCCGCAAACCTTCCAGGGTGCACAGATCACTTCCAACGAAATCGACGGCCTGACCCTGTACGGTGGTCAGTTCTGGAAGAACAGCCAGCGTCACGATGCCAGCCGTGAAGACATGTCGTTCAGCGGTGTTGAGGGTGATGATTTCAACTTCGGCGGTGGTGAGTACCGCTTCAACGGCAACAGCACCATGGTCGGCGTCTGGCACGCGCGCCTGGAAGATGTGTACAAGCAGAGCTTCGTGCAGCTGACCCACAGCCAACCGGTCGGTGACTGGGTACTGGGCGCCAACCTGGGCTACTTCAACGGCAAGGACGAAGGCGCGGCCAAAGCCGGCGATCTGGACAACAAGGTGTATCAGGGCGCGCTGTCGGCCAAGAGAGGCAACAATACCTTTCAGGTCACCTACCAGCGCCTGAGCGGTGATACCAAGTTCCTGCGTATCGATGGCGCCAGTGGTGGCATGCTGGTCAACGACGGCTTCCTATCGGCCTTCGACAACCCCGAGGAACGCTCCTGGCAGCTACGTCATGACTACAACTTCGCAGGCCTCGGCATCCCGGGCCTGACCCTGATGAACCGCTATACCAGCGGCTCCAATATCCATGCCGGCGGTCGCACCGACGCCGAAGAGTGGAGCCGGGAGACCGAGCTGGCCTACACCATTCAGGAAGGCACCCTGAAGAACCTCAACGTGCGCTGGCGTAACTCCGACGTCCGCCGCGACGTTGGCCAGGATCTGCATGAGAACCGCCTGATCATCAACTATCCGCTGTCGATTCTGTAA
PROTEIN sequence
Length: 420
MTARNIIPLALLGSTALALVMPTATHAAGFVEDAKVTLGLRNYYFNRNYLNGTDPLIRGERQGQAEGWTQSFILDARSGYTQGTVGFGLDVLGLYSIKLDGNRGAANTQLMPIQDDGEAADQYGRTAVAAKAKISKTELKVGEWFAVLPILRADDGRSLPQTFQGAQITSNEIDGLTLYGGQFWKNSQRHDASREDMSFSGVEGDDFNFGGGEYRFNGNSTMVGVWHARLEDVYKQSFVQLTHSQPVGDWVLGANLGYFNGKDEGAAKAGDLDNKVYQGALSAKRGNNTFQVTYQRLSGDTKFLRIDGASGGMLVNDGFLSAFDNPEERSWQLRHDYNFAGLGIPGLTLMNRYTSGSNIHAGGRTDAEEWSRETELAYTIQEGTLKNLNVRWRNSDVRRDVGQDLHENRLIINYPLSIL*