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S20_scaffold_529_curated_5

Organism: S20_RifleGW_Geobacter_56_21_curated

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 ASCG 14 / 38 MC: 1
Location: comp(4692..5447)

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridylate synthase I {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA-uridine isomerase I {ECO:0000256|HAMAP-Rule:MF_00171}; TaxID=269799 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 65.2
  • Coverage: 244.0
  • Bit_score: 314
  • Evalue 1.10e-82
tRNA pseudouridine synthase A n=2 Tax=Geobacter metallireducens RepID=Q39Y26_GEOMG similarity UNIREF
DB: UNIREF100
  • Identity: 65.2
  • Coverage: 244.0
  • Bit_score: 314
  • Evalue 7.60e-83
  • rbh
truA; tRNA pseudouridine synthase A similarity KEGG
DB: KEGG
  • Identity: 65.2
  • Coverage: 244.0
  • Bit_score: 314
  • Evalue 2.20e-83
  • rbh

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Taxonomy

Geobacter metallireducens → Geobacter → Desulfuromonadales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 756
ATGCTGCTATACTGGCCCGCTATGCGCATCATACGGCTCACCATTGAATTCGACGGCACCAACTACGTCGGCTGGCAACTGCAGCCCAATGGGATTTCCATCCAGCAGGTAGTCGAGGAGGCCCTTGCGAAACTTCTGGGGGAACAGGTACGGGTTTATTCTTCAGGGCGTACCGATGCGGGGGTTCACGCCAGGGGAATGGTGGCGGCTTTCCGGACGGAGCGTAATCTGCCGCTGCGCGCATTCAGTTACGGTCTCAACGTTTTGCTTCCTCCCGACATAGTTGTCCACGAGGCCGCTGAGGCGGCTCCGGATTTCAATCCCCGCAGCGATGCAAAAGGTAAGCATTACCGGTATACTATTCACATGGTGCGGCACCGTTCTCCCCTGTCCCGCCACTTCGCCTGGCAGTTGCGAAGCGATCTCGATCTCGATGCCATGCGGGAAGTAGCTGGTTGCTTCGTTGGTGAACGGGATTACGCCGCGTTTTGTGCTTCCGGTTCGAGTGTGCGCACCACGGTCAGAACTGTTTTTTCTGTGGACATCGATCAGCAGGGTGAATTCATCCACATAGATGTCAAAGGTTCGGGATTTCTCCGTAACATGGTTCGCATCATGACTGGAACTCTGGTAGAGGTGGGGCAGGGCAAGATCCGCCCCGAGGCGGTTCACCAGCTGTTTCTCGGCCAGACGCGGATGGATGCGGGGATGACGGCGCCGGCACAGGGACTCTGTCTGATGGAAGTGTATTATTGA
PROTEIN sequence
Length: 252
MLLYWPAMRIIRLTIEFDGTNYVGWQLQPNGISIQQVVEEALAKLLGEQVRVYSSGRTDAGVHARGMVAAFRTERNLPLRAFSYGLNVLLPPDIVVHEAAEAAPDFNPRSDAKGKHYRYTIHMVRHRSPLSRHFAWQLRSDLDLDAMREVAGCFVGERDYAAFCASGSSVRTTVRTVFSVDIDQQGEFIHIDVKGSGFLRNMVRIMTGTLVEVGQGKIRPEAVHQLFLGQTRMDAGMTAPAQGLCLMEVYY*