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S23_scaffold_575_curated_12

Organism: S23_RifCSP_Comamonadaceae_63_35_curated

near complete RP 51 / 55 MC: 2 BSCG 50 / 51 ASCG 13 / 38
Location: comp(8378..9538)

Top 3 Functional Annotations

Value Algorithm Source
extracellular ligand-binding receptor; K01999 branched-chain amino acid transport system substrate-binding protein id=5080542 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD similarity UNIREF
DB: UNIREF100
  • Identity: 59.7
  • Coverage: 380.0
  • Bit_score: 472
  • Evalue 2.60e-130
putative ABC transporter, branched-chain amino acid-binding protein similarity KEGG
DB: KEGG
  • Identity: 58.4
  • Coverage: 380.0
  • Bit_score: 459
  • Evalue 4.90e-127
Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 60.3
  • Coverage: 380.0
  • Bit_score: 479
  • Evalue 3.00e-132

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Taxonomy

R_Burkholderiales_67_14 → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1161
ATGAAATATTCTGTTCTTGCCATGGCGACTGCTGCCTGTTTGCTGGCTGGCGGCGCTGCACTTGCGCAAACCCAGGGCGTGACCAAGGATGAGCTCGTTATTGGTTCGCTCGCCGATCTTTCCGGGCCGCTGTCTGGTCCCGGCAAGCAGATTCGAAACGGCATGCTCCTGCGCATGGAAGAGGCCAACGAGGGGGGCGGAATTCACGGCCGCAAGCTCACCATCAAGTTCGAGGACACTGCCTACGACCCGCGCAAGGGCGTGCTGGGCGCCCAGAAACTGGTCAACAGCGACAAGGTGTTTGCCATCGCGGGTTCCCCTGGTACGGTGATCAATACTGCGGCGTTTCCGGTGATGTTCCCCAAGAACGTCATCAATTTCATGCCCATCTCAGGCGCTCGCGAAATGTACGAGCCGGCCCACAAGCTGAAGTTTGCGTTTATTTCGACTTACTACGACCAGGTCAAGCTGTCGCTGCCTGACTTCGTCAAGGAGAAAAACCTCAAACGCGTCTGCGCCTTGCTGCAAGACGACGATTTGGGCCTGGAAGTGCAGCGTGGCGCCACCGATGGCCTGGCCACCATCGGCATGAAACTGGAAGAAACGGCCACCTACAAGCGCGGCGCCACCGATTTCACCACCCAGATGCAAAGGCTGGCATCGTCCAAGTGCGATACCGTGGTGCTGGCGGCCATCATTCGCGAGACGATCGGCGCCATGGCCGCTGCGAACCGGTTGTCGTTCAACCCCGTATTCTTCGGCTCCACCGCGTCCTACAGCGAATTGATCCCGAAGCTGGGCGGCAACGCAGTCAACGGACTGTACGCCACCATGACAGTCGAAGTGCCTTACCTGGATGCCCCTAGCGCACCAGTGAAGGCATGGGCAGAGAAGTACAAGACACGCTTTAACGAGGACCCAGGCCTGTACTCTGTGTACGGTTACGAGCTGTTGGACATCTTTGTGGAAGGCGCAAAGAAAGCAGGCGCGAACCTGACCACAGACTCCTTCATCGCCGCCATGGAGAGCTTCAAGCGCGAACCGGACATGTTCGGCTCGCCCGTCATGACCTGGTCTTCTGAAATGCGGCTTGGTAACGCGAAGGCGCGCCTGTCGCAAATTCAGGATGGACGCTGGAAGGTCGTTTCTGACTACAAATAA
PROTEIN sequence
Length: 387
MKYSVLAMATAACLLAGGAALAQTQGVTKDELVIGSLADLSGPLSGPGKQIRNGMLLRMEEANEGGGIHGRKLTIKFEDTAYDPRKGVLGAQKLVNSDKVFAIAGSPGTVINTAAFPVMFPKNVINFMPISGAREMYEPAHKLKFAFISTYYDQVKLSLPDFVKEKNLKRVCALLQDDDLGLEVQRGATDGLATIGMKLEETATYKRGATDFTTQMQRLASSKCDTVVLAAIIRETIGAMAAANRLSFNPVFFGSTASYSELIPKLGGNAVNGLYATMTVEVPYLDAPSAPVKAWAEKYKTRFNEDPGLYSVYGYELLDIFVEGAKKAGANLTTDSFIAAMESFKREPDMFGSPVMTWSSEMRLGNAKARLSQIQDGRWKVVSDYK*