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S28_scaffold_1575_curated_5

Organism: S28_Methanosarcina_42_8_curated

near complete RP 33 / 55 MC: 6 BSCG 23 / 51 MC: 3 ASCG 36 / 38 MC: 1
Location: 3406..4029

Top 3 Functional Annotations

Value Algorithm Source
Probable ribosomal RNA small subunit methyltransferase A n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=RSMA_METAC similarity UNIREF
DB: UNIREF100
  • Identity: 91.3
  • Coverage: 207.0
  • Bit_score: 377
  • Evalue 4.60e-102
  • rbh
16S rRNA methyltransferase {ECO:0000313|EMBL:KKH94156.1}; TaxID=1483602 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina sp. 1.H.T.1A.1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 90.8
  • Coverage: 207.0
  • Bit_score: 380
  • Evalue 1.30e-102
ksgA; dimethyladenosine transferase similarity KEGG
DB: KEGG
  • Identity: 91.3
  • Coverage: 207.0
  • Bit_score: 377
  • Evalue 1.30e-102
  • rbh

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Taxonomy

Methanosarcina sp. 1.H.T.1A.1 → Methanosarcina → Methanosarcinales → Methanomicrobia → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 624
GTGATTGCAGTCGAGCTTGACCCTGCACTTATTTCAGTCCTGCACGACCGTTTTGATGCTGTCGAGAATATAGAGATTATAGAAGGCGACGCCCTGAAAGTCGATTTCCCTGAATTTGACAAGGTTGTTTCAAATCTCCCTTATTCCATCTCCTCGGAAATTACCTTCAAGCTTCTGCGCTACAAATTCGAACTTGGGATTCTTATGTACCAGTATGAGTTTGCAGCACGCATGGTATCTCCTCCGGGCTGCAAAGACTACTCCCGCCTCACGGTCGATACATATTATTTTGCCGATGCTTCCATTCTCATGAAAGTCCCAAAAGGCGTTTTCCAGCCAGCGCCTGAAGTAGATTCCGCAGTCGTCAAACTGACCCCGCGCCCTGCCCCCTTCGAGGTTCGCGACGAAGCCTTCTTCCTCGAATTTGTTACTGCAGTTTTCAGCCAGCGCCGGAAAAAGCTGAGGAACTCAATCCTGAACACAAATTATAAGCTCAAAATCCCGGACGTCAAAGAAGTTGTAAACCAGCTTCCTGAGGATTTCATGAACAAAAGAGCTGAAAACCTTACTCCTGAAGAGCTTGCCAGCGTTGCAAACATGATTTATGACCTTAAATCCCGATAA
PROTEIN sequence
Length: 208
VIAVELDPALISVLHDRFDAVENIEIIEGDALKVDFPEFDKVVSNLPYSISSEITFKLLRYKFELGILMYQYEFAARMVSPPGCKDYSRLTVDTYYFADASILMKVPKGVFQPAPEVDSAVVKLTPRPAPFEVRDEAFFLEFVTAVFSQRRKKLRNSILNTNYKLKIPDVKEVVNQLPEDFMNKRAENLTPEELASVANMIYDLKSR*