ggKbase home page

13_1_40cm_scaffold_15536_7

Organism: 13_1_40CM_1_Euryarchaeota_megabin_63_20

megabin RP 35 / 55 MC: 32 BSCG 23 / 51 MC: 20 ASCG 38 / 38 MC: 38
Location: comp(2468..3166)

Top 3 Functional Annotations

Value Algorithm Source
Exosome complex component Rrp4 n=1 Tax=Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1 RepID=R9T5L6_9EURY similarity UNIREF
DB: UNIREF100
  • Identity: 52.3
  • Coverage: 220.0
  • Bit_score: 250
  • Evalue 2.10e-63
RNA-binding protein Rrp4 (containing S1 domain and KH domain) Tax=RBG_16_Euryarchaeota_67_27_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 75.9
  • Coverage: 232.0
  • Bit_score: 367
  • Evalue 1.30e-98
exosome complex RNA-binding protein Rrp4 similarity KEGG
DB: KEGG
  • Identity: 52.3
  • Coverage: 220.0
  • Bit_score: 250
  • Evalue 6.00e-64

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RBG_16_Euryarchaeota_67_27_curated → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 699
ATGCAGGGTAGCGGGTCGCTCCGCCCGATTGTCATTCCGGGCGAAGCCGTCGGCGGCCCCGGACTGAAGCCGGGACCTGGGACATACAGCGAAGGCGGACAGCTTTTCGCGGCGCAATTGGGGATTCGGAACGAGCAGGACGGGCTCGTCAGCGTGATCCCCCTGAACGGGCGCTACATTCCCCAACGCGGCGATGCGGTAATCGGCGAGGTCACCGACCTCGGTGCCTCCCACTGGCTCGTCGACATCAACTCCCCCTATCCCGCGCCCCTTCATGCGACCGAGTCGCCGTGGCGGGTCGAGTTCGGCGACACCGCGCGGTACCTGAAGGTCGGCGACGTGATCATGGCCCACGTGTTGAGCGTGGACGAGATCAAACGGGTCCAGCTCACGATGCAGGAGCATGAGGCACGCCGGCTGAGCGGCGGCATGGTGATTGAGATCTCCCCGACGAAGGTTCCGCGGGTGATCGGGAAGCAGGGGAGCATGGTCTCCCTGATCAAGGACCTCACCCACTGCCAGATCTACGTCGGGCAGAACGGCCGGATTTGGCTGGACGGGAATGACCGCGACACCGCGATCGCCGCGCGGGCGATCCGACTGATCGAGGAACGCGCCCAAGCGTCCGGCCTTACGGAAGCCGTGCGCGAGCTGATCGAAGGGGCGCAGCGAGAGACGCGAGGGCCCAGGCCCTCCTGA
PROTEIN sequence
Length: 233
MQGSGSLRPIVIPGEAVGGPGLKPGPGTYSEGGQLFAAQLGIRNEQDGLVSVIPLNGRYIPQRGDAVIGEVTDLGASHWLVDINSPYPAPLHATESPWRVEFGDTARYLKVGDVIMAHVLSVDEIKRVQLTMQEHEARRLSGGMVIEISPTKVPRVIGKQGSMVSLIKDLTHCQIYVGQNGRIWLDGNDRDTAIAARAIRLIEERAQASGLTEAVRELIEGAQRETRGPRPS*