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ACD71_78_4

Organism: ACD71

RP 5 / 55 MC: 2 BSCG 4 / 51 ASCG 0 / 38
Location: 2120..3136

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 33.0
  • Coverage: 330.0
  • Bit_score: 176
  • Evalue 1.60e-41
Sigma70_r4 (db=HMMPfam db_id=PF04545 from=18 to=67 evalue=3.3e-12 interpro_id=IPR007630 interpro_description=RNA polymerase sigma-70 region 4 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: transcription factor activity (GO:0003700), Biological Process: transcription initiation (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:0016987)) iprscan interpro
DB: HMMPfam
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 3.30e-12
Sigma3 and sigma4 domains of RNA polymerase sigma factors (db=superfamily db_id=SSF88659 from=16 to=82 evalue=7.6e-12 interpro_id=IPR013324 interpro_description=RNA polymerase sigma factor, region 3/4 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: transcription factor activity (GO:0003700), Biological Process: transcription initiation (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:0016987)) iprscan interpro
DB: superfamily
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 7.60e-12

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Taxonomy

uncultured bacterium (gcode 4) → Bacteria

Sequences

DNA sequence
Length: 1017
ATGGGTGCAGTTCTCAATACCAAACAAATTCAGGACAGTTTTATCTCTATCCTTTCCTGATTGACCGACAAAGAACAATCCGTTATCACCCGTCGTATCGGGCTCGGAGGAGAGAAGGAGACTCTTCAGTCCATTGGTAATACCTACGGGATTACCCGAGAGCGTGTTCGTCAAATCGAAGATGTTGGTATCAAGAAGATTGGTCGAATTGTTCGATCGAGCGCCCTCGTATATATCCAGGAGACTGCCGAGAAAATTCTAGGAGTATCCGGAGGACTTATGACAAAAGACAAGCTTGTCGCGGCTTTGATTGAAGAGATTCGTATCGAAAATACCCTCAACGAAGGGATTCTTGAGGTCATTGTTCAATCGGATTTCAATATCCAAAAAAGCAAACCGCAAATCGGAACCCAGACGTATTTTTATACTCCAGATATTCAGAAAAAACTCATTGGTGCTATCCATAAGGAAGCGATGACTATTCTTAAAAAGAAAGGGGATATCATGGAAACAACGGCACTGTACGAAATAATCCGATCAAATCTCGCGTCTGCTTTCGGGAAAATAGAAGCGTGTCTTATCGATGCTGTTCTTGATATCTTTGATGAGTTGGTGAAGGGAGAAGAAAAATACATCGGTCTTACCAAGTGGAAGATCCTTAATCCCTCAACACTCAAGGACAAGGCTGTATATGTTTTCAAGAAAGAAAAGAATCCCATCCATTTCGTGGAACTTGCCAATAAGATTTCCAATTATTTCGGAGAGCCGGTAAAGGTTGCAACCATCCACAACGAACTTATCCGAAATAATGAATTCGTCCTCATAGGACGTGGTATCTATGTTCTCAAGGAATGGGGATACAAGCCGGGAACGGTACTCGATGTCATTATGGATATCTTCCAGAAGGCAAAAACTCCGCTCTCCACCGAAGAAATCATCGCATGAGTTCTCAAAACTCGACAAGTGAAGACAAGCACCATCTACATGAATCTCCAAAATAAGCAGCAGATTGAACGA
PROTEIN sequence
Length: 339
MGAVLNTKQIQDSFISILSGLTDKEQSVITRRIGLGGEKETLQSIGNTYGITRERVRQIEDVGIKKIGRIVRSSALVYIQETAEKILGVSGGLMTKDKLVAALIEEIRIENTLNEGILEVIVQSDFNIQKSKPQIGTQTYFYTPDIQKKLIGAIHKEAMTILKKKGDIMETTALYEIIRSNLASAFGKIEACLIDAVLDIFDELVKGEEKYIGLTKWKILNPSTLKDKAVYVFKKEKNPIHFVELANKISNYFGEPVKVATIHNELIRNNEFVLIGRGIYVLKEWGYKPGTVLDVIMDIFQKAKTPLSTEEIIAGVLKTRQVKTSTIYMNLQNKQQIER