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ACD72_212_4

Organism: ACD72

megabin RP 44 / 55 MC: 27 BSCG 44 / 51 MC: 25 ASCG 0 / 38
Location: comp(1403..2053)

Top 3 Functional Annotations

Value Algorithm Source
pseudouridine synthase similarity KEGG
DB: KEGG
  • Identity: 52.8
  • Coverage: 212.0
  • Bit_score: 222
  • Evalue 9.60e-56
PSI_RLU (db=PatternScan db_id=PS01129 from=55 to=69 evalue=0.0 interpro_id=IPR006224 interpro_description=Pseudouridine synthase, RluC/RluD, conserved site GO=Biological Process: pseudouridine synthesis (GO:0001522), Molecular Function: RNA binding (GO:0003723), Biological Process: RNA modification (GO:0009451), Molecular Function: pseudouridine synthase activity (GO:0009982)) iprscan interpro
DB: PatternScan
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 0.0
Pseudouridine synthase (db=superfamily db_id=SSF55120 from=2 to=216 evalue=1.2e-47 interpro_id=IPR020103 interpro_description=Pseudouridine synthase, catalytic domain GO=Biological Process: pseudouridine synthesis (GO:0001522), Molecular Function: RNA binding (GO:0003723), Biological Process: RNA modification (GO:0009451), Molecular Function: pseudouridine synthase activity (GO:0009982)) iprscan interpro
DB: superfamily
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 1.20e-47

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Taxonomy

RIFOXYD2_FULL_OD1_Magasanikbacteria_36_9_curated → Magasanikbacteria → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 651
ATGGTAAAAGTTTTATACGAAGACAATCATCTAATCGCTGTTTTTAAACCAGCCGGTACTTTGGTTCAGGGTGATGAGACCGGGGACAAATGTTTGATGGATGAGGTGAAAGAATATTTAAAAGAAAAATATAATAAACCTGGACAGGTTTTTTTGGGATTATTACATCGTCTGGATCGACCGGTAAGTGGGGTAGTTTTATTTTCAAAAACTAGTAAGGGGGCATCGCGATTATCTGAACAAATTCGTTTACATAAAGTTCAAAAAACGTATCAAACTTTGGTGGAAGGAAAAGTTAAAAAAGAAAAAGGCACTTTGATAAATTGGTTGAGAAAAGATGAACAAAAAAATAAAGTATCGGTTTTTGATGAAGAAACAAAAGATACTTTGTATGCTGAATTAGATTACAAAGTTTTGAAATCAAATAATAAAAATTCATTGTTAGAAATTAATCTTAAAACTGGACGTCCCCATCAGATTAGGACGCAATTAGCTCATATAGGCCATCCGATCGTTGGAGACCTTAAATATGGGGCTACAGCACCGTTGCCAGATAAATCCATTGCTCTATGTGCCACATCTTTTATGTTTGAAGCCGCTACGGGTGGTGAAATAAAAACAGCGACTGTTGAGCCGCCGTTTGATCTATAG
PROTEIN sequence
Length: 217
MVKVLYEDNHLIAVFKPAGTLVQGDETGDKCLMDEVKEYLKEKYNKPGQVFLGLLHRLDRPVSGVVLFSKTSKGASRLSEQIRLHKVQKTYQTLVEGKVKKEKGTLINWLRKDEQKNKVSVFDEETKDTLYAELDYKVLKSNNKNSLLEINLKTGRPHQIRTQLAHIGHPIVGDLKYGATAPLPDKSIALCATSFMFEAATGGEIKTATVEPPFDL*