Value | Algorithm | Source | Identity | Coverage | Bit score | Evalue | Cross references |
---|---|---|---|---|---|---|---|
transcription elongation factor GreA | similarity |
KEGG
DB: KEGG |
76.4 | 161.0 | 248 | 1.20e-63 | dsf:UWK_03002 |
GREAB_2 (db=PatternScan db_id=PS00830 from=121 to=137 evalue=0.0 interpro_id=IPR018151 interpro_description=Transcription elongation factor, GreA/GreB, conserved site GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: transcription elongation regulator activity (GO:0003711), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) | iprscan |
interpro
DB: PatternScan |
null | null | null | 0.0 | dsf:UWK_03002 |
GREAB_1 (db=PatternScan db_id=PS00829 from=18 to=49 evalue=0.0 interpro_id=IPR018151 interpro_description=Transcription elongation factor, GreA/GreB, conserved site GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: transcription elongation regulator activity (GO:0003711), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) | iprscan |
interpro
DB: PatternScan |
null | null | null | 0.0 | dsf:UWK_03002 |
greA: transcription elongation factor GreA (db=HMMTigr db_id=TIGR01462 from=6 to=156 evalue=2.8e-73 interpro_id=IPR006359 interpro_description=Transcription elongation factor GreA GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: transcription elongation regulator activity (GO:0003711), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) | iprscan |
interpro
DB: HMMTigr |
null | null | null | 2.80e-73 | dsf:UWK_03002 |
GreA_GreB_N (db=HMMPfam db_id=PF03449 from=3 to=75 evalue=1.3e-27 interpro_id=IPR022691 interpro_description=Transcription elongation factor, GreA/GreB, N-terminal GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: transcription elongation regulator activity (GO:0003711), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) | iprscan |
interpro
DB: HMMPfam |
null | null | null | 1.30e-27 | dsf:UWK_03002 |
GreA transcript cleavage protein, N-terminal domain (db=superfamily db_id=SSF46557 from=3 to=80 evalue=1.3e-26 interpro_id=IPR022691 interpro_description=Transcription elongation factor, GreA/GreB, N-terminal GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: transcription elongation regulator activity (GO:0003711), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) | iprscan |
interpro
DB: superfamily |
null | null | null | 1.30e-26 | dsf:UWK_03002 |
GreA_GreB (db=HMMPfam db_id=PF01272 from=83 to=156 evalue=3.2e-25 interpro_id=IPR001437 interpro_description=Transcription elongation factor, GreA/GreB, C-terminal GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: transcription elongation regulator activity (GO:0003711), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) | iprscan |
interpro
DB: HMMPfam |
null | null | null | 3.20e-25 | dsf:UWK_03002 |
no description (db=Gene3D db_id=G3DSA:1.10.287.180 from=2 to=76 evalue=1.5e-23 interpro_id=IPR022691 interpro_description=Transcription elongation factor, GreA/GreB, N-terminal GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: transcription elongation regulator activity (GO:0003711), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) | iprscan |
interpro
DB: Gene3D |
null | null | null | 1.50e-23 | dsf:UWK_03002 |
FKBP-like (db=superfamily db_id=SSF54534 from=80 to=158 evalue=2.1e-22) | iprscan |
interpro
DB: superfamily |
null | null | null | 2.10e-22 | dsf:UWK_03002 |
no description (db=Gene3D db_id=G3DSA:3.10.50.30 from=76 to=155 evalue=1.3e-19 interpro_id=IPR001437 interpro_description=Transcription elongation factor, GreA/GreB, C-terminal GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: transcription elongation regulator activity (GO:0003711), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) | iprscan |
interpro
DB: Gene3D |
null | null | null | 1.30e-19 | dsf:UWK_03002 |
GreA_GreB (db=HAMAP db_id=MF_00105 from=2 to=157 evalue=25.746) | iprscan |
interpro
DB: HAMAP |
null | null | null | 2.57e+01 | dsf:UWK_03002 |
Transcription elongation factor GreA {ECO:0000256|HAMAP-Rule:MF_00105, ECO:0000256|SAAS:SAAS00018706}; Transcript cleavage factor GreA {ECO:0000256|HAMAP-Rule:MF_00105}; TaxID=77133 species="Bacteria; |
UNIPROT
DB: UniProtKB |
100.0 | 161.0 | 312 | 4.50e-82 | K1YD72_9BACT | |
Transcription elongation factor GreA n=1 Tax=Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1) RepID=M1PT87_DESSD | similarity |
UNIREF
DB: UNIREF90 |
76.4 | null | 248 | 1.80e-63 | dsf:UWK_03002 |