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ACD75_191

Alias: ACD75_6639.36249.38

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Displaying items 1-30 of 35 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD75_191_1

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2..4126
DNA (4125bp) protein (1375aa)
hypothetical protein
seg (db=Seg db_id=seg from=1257 to=1266)
coiled-coil (db=Coil db_id=coil from=992 to=1013 evalue=NA)
TETRATRICOPEPTIDE REPEAT PROTEIN, TPR (db=HMMPanther db_id=PTHR23083 from=76 to=459 evalue=4.3e-21)
ACD75_191_2

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4207..4692
DNA (486bp) protein (162aa)
transcription elongation factor GreA
GREAB_2 (db=PatternScan db_id=PS00830 from=121 to=137 evalue=0.0 interpro_id=IPR018151 interpro_description=Transcription elongation factor, GreA/GreB, conserved site GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: transcription elongation regulator activity (GO:0003711), Biological Process: regulation of transcription, DNA-dependent (GO:0006355))
GREAB_1 (db=PatternScan db_id=PS00829 from=18 to=49 evalue=0.0 interpro_id=IPR018151 interpro_description=Transcription elongation factor, GreA/GreB, conserved site GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: transcription elongation regulator activity (GO:0003711), Biological Process: regulation of transcription, DNA-dependent (GO:0006355))
greA: transcription elongation factor GreA (db=HMMTigr db_id=TIGR01462 from=6 to=156 evalue=2.8e-73 interpro_id=IPR006359 interpro_description=Transcription elongation factor GreA GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: transcription elongation regulator activity (GO:0003711), Biological Process: regulation of transcription, DNA-dependent (GO:0006355))
ACD75_191_3

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comp(4719..5324)
DNA (606bp) protein (202aa)
transcriptional regulator
Transcriptional regulator, TetR family n=2 Tax=Desulfurivibrio alkaliphilus AHT2 RepID=C8QXS1_9DELT (db=UNIREF evalue=3.0e-61 bit_score=238.0 identity=57.14 coverage=95.5445544554455)
coiled-coil (db=Coil db_id=coil from=100 to=121 evalue=NA)
no description (db=Gene3D db_id=G3DSA:1.10.357.10 from=49 to=191 evalue=7.5e-27 interpro_id=IPR015893 interpro_description=Tetracycline transcriptional regulator, TetR-like, C-terminal GO=Biological Process: negative regulation of transcription (GO:0016481), Molecular Function: specific transcriptional repressor activity (GO:0016566))
ACD75_191_4

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5620..7395
DNA (1776bp) protein (592aa)
Probable phosphoribosylamine--glycine ligase n=1 Tax=Desulfotalea psychrophila RepID=Q6AL58_DESPS (db=UNIREF evalue=0.0 bit_score=909.0 identity=75.21 coverage=99.3243243243243)
phosphoribosylamine--glycine ligase
phosphoribosylamine--glycine ligase
seg (db=Seg db_id=seg from=426 to=433)
ACD75_191_5

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7388..8035
DNA (648bp) protein (216aa)
translation factor SUA5
TIGR00057: Sua5/YciO/YrdC/YwlC family prote (db=HMMTigr db_id=TIGR00057 from=4 to=204 evalue=1.8e-63 interpro_id=IPR004388 interpro_description=Sua5/YciO/YrdC/YwlC)
Sua5_yciO_yrdC (db=HMMPfam db_id=PF01300 from=20 to=195 evalue=6.2e-59 interpro_id=IPR006070 interpro_description=Sua5/YciO/YrdC, N-terminal)
no description (db=Gene3D db_id=G3DSA:3.90.870.10 from=1 to=203 evalue=4.7e-58 interpro_id=IPR017945 interpro_description=DHBP synthase RibB-like alpha/beta domain)
ACD75_191_6

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8214..8537
DNA (324bp) protein (108aa)
HPt domain-containing protein
seg (db=Seg db_id=seg from=94 to=107)
Histidine-containing phosphotransfer domain, HPT domain (db=superfamily db_id=SSF47226 from=1 to=106 evalue=4.1e-17 interpro_id=IPR008207 interpro_description=Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO=Biological Process: two-component signal transduction system (phosphorelay) (GO:0000160), Molecular Function: signal transducer activity (GO:0004871))
Hpt (db=HMMPfam db_id=PF01627 from=24 to=105 evalue=3.6e-10 interpro_id=IPR008207 interpro_description=Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO=Biological Process: two-component signal transduction system (phosphorelay) (GO:0000160), Molecular Function: signal transducer activity (GO:0004871))
ACD75_191_7

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comp(8604..10289)
DNA (1686bp) protein (562aa)
ABC transporter ATP-binding protein
ABC transporter ATP-binding protein
Probable ABC transporter, ATP-binding protein n=1 Tax=Desulfotalea psychrophila RepID=Q6AL61_DESPS (db=UNIREF evalue=0.0 bit_score=887.0 identity=82.53 coverage=99.4661921708185)
seg (db=Seg db_id=seg from=352 to=366)
ACD75_191_8

Not on your lists

comp(10350..10982)
DNA (633bp) protein (211aa)
soluble lytic murein transglycosylase-like protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
Lysozyme-like (db=superfamily db_id=SSF53955 from=56 to=203 evalue=5.7e-22)
no description (db=Gene3D db_id=G3DSA:1.10.530.10 from=51 to=203 evalue=2.9e-17)
ACD75_191_9

Not on your lists

comp(10983..12293)
DNA (1311bp) protein (437aa)
aminopeptidase 2
aminopeptidase 2
M18 family aminopeptidase n=1 Tax=Desulfotalea psychrophila RepID=Q6AL63_DESPS (db=UNIREF evalue=9.0e-131 bit_score=470.0 identity=55.5 coverage=97.4828375286041)
seg (db=Seg db_id=seg from=270 to=283)
ACD75_191_10

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comp(12714..12926)
DNA (213bp) protein (71aa)
12714..12926 - (rbs_motif=GGA/GAG/AGG rbs_spacer=11-12bp)
Uncharacterized protein {ECO:0000313|EMBL:EKD35297.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD75_191_11

Not on your lists

comp(13199..14197)
DNA (999bp) protein (333aa)
TIGR00266 family protein
TIGR00266 family protein
Putative uncharacterized protein n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JV95_DESAC (db=UNIREF evalue=5.0e-108 bit_score=394.0 identity=57.74 coverage=98.1981981981982)
TRAP-like (db=superfamily db_id=SSF51219 from=72 to=315 evalue=3.9e-83 interpro_id=IPR016031 interpro_description=Tryptophan RNA-binding attenuator protein-like)
ACD75_191_12

Not on your lists

comp(14240..15229)
DNA (990bp) protein (330aa)
hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=21 to=40)
seg (db=Seg db_id=seg from=112 to=124)
Uncharacterized protein {ECO:0000313|EMBL:EKD35299.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD75_191_13

Not on your lists

15542..16471
DNA (930bp) protein (310aa)
manganese-dependent inorganic pyrophosphatase (EC:3.6.1.1)
manganese-dependent inorganic pyrophosphatase (EC:3.6.1.1)
Probable manganese-dependent inorganic pyrophosphatase n=1 Tax=Desulfotalea psychrophila RepID=Q6AL66_DESPS (db=UNIREF evalue=1.0e-120 bit_score=436.0 identity=77.35 coverage=99.3548387096774)
seg (db=Seg db_id=seg from=17 to=28)
ACD75_191_14

Not on your lists

16728..17234
DNA (507bp) protein (169aa)
16728..17234 + (rbs_motif=None rbs_spacer=None)
Uncharacterized protein {ECO:0000313|EMBL:EKD35276.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD75_191_15

Not on your lists

17391..17684
DNA (294bp) protein (98aa)
17391..17684 + (rbs_motif=None rbs_spacer=None)
Uncharacterized protein {ECO:0000313|EMBL:EKD35277.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD75_191_16

Not on your lists

17892..18104
DNA (213bp) protein (71aa)
17892..18104 + (rbs_motif=None rbs_spacer=None)
Uncharacterized protein {ECO:0000313|EMBL:EKD35278.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD75_191_17

Not on your lists

comp(18048..18206)
DNA (159bp) protein (53aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=26)
Uncharacterized protein {ECO:0000313|EMBL:EKD35279.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD75_191_18

Not on your lists

comp(18234..18884)
DNA (651bp) protein (217aa)
hemolysin A
Related to hemolysin A n=1 Tax=Desulfotalea psychrophila RepID=Q6AKI2_DESPS (db=UNIREF evalue=8.0e-67 bit_score=256.0 identity=64.62 coverage=96.3133640552995)
seg (db=Seg db_id=seg from=45 to=56)
tly: hemolysin TlyA family protein (db=HMMTigr db_id=TIGR00478 from=1 to=206 evalue=2.0e-62 interpro_id=IPR004538 interpro_description=Haemolysin A GO=Molecular Function: RNA binding (GO:0003723), Biological Process: hemolysis by symbiont of host erythrocytes (GO:0019836))
ACD75_191_19

Not on your lists

comp(18993..20063)
DNA (1071bp) protein (357aa)
hypothetical protein
seg (db=Seg db_id=seg from=188 to=196)
seg (db=Seg db_id=seg from=148 to=165)
seg (db=Seg db_id=seg from=220 to=237)
ACD75_191_20

Not on your lists

comp(20101..21411)
DNA (1311bp) protein (437aa)
Protein tolB n=1 Tax=Desulfotalea psychrophila RepID=TOLB_DESPS (db=UNIREF evalue=2.0e-147 bit_score=526.0 identity=58.68 coverage=93.3638443935927)
TolB protein [precursor]
TolB protein [precursor]
seg (db=Seg db_id=seg from=118 to=129)
ACD75_191_21

Not on your lists

comp(21442..22380)
DNA (939bp) protein (313aa)
TonB family protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=9 to=31)
seg (db=Seg db_id=seg from=203 to=215)
seg (db=Seg db_id=seg from=189 to=200)
ACD75_191_22

Not on your lists

comp(22411..22827)
DNA (417bp) protein (139aa)
Cell division and transport-associated protein TolR
transmembrane_regions (db=TMHMM db_id=tmhmm from=13 to=35)
tolR: protein TolR (db=HMMTigr db_id=TIGR02801 from=12 to=133 evalue=2.7e-54 interpro_id=IPR014168 interpro_description=Biopolymer transport, TolR)
ExbD (db=HMMPfam db_id=PF02472 from=9 to=134 evalue=1.5e-28 interpro_id=IPR003400 interpro_description=Biopolymer transport protein ExbD/TolR GO=Molecular Function: transporter activity (GO:0005215), Biological Process: transport (GO:0006810), Cellular Component: membrane (GO:0016020))
ACD75_191_23

Not on your lists

comp(22834..23535)
DNA (702bp) protein (234aa)
Cell division and transport-associated protein TolQ
transmembrane_regions (db=TMHMM db_id=tmhmm from=135 to=157)
transmembrane_regions (db=TMHMM db_id=tmhmm from=182 to=204)
transmembrane_regions (db=TMHMM db_id=tmhmm from=13 to=35)
ACD75_191_24

Not on your lists

comp(23740..24183)
DNA (444bp) protein (148aa)
3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratase
no description (db=Gene3D db_id=G3DSA:3.10.129.10 from=3 to=147 evalue=8.2e-35)
Thioesterase/thiol ester dehydrase-isomerase (db=superfamily db_id=SSF54637 from=5 to=147 evalue=1.4e-34)
FabA (db=HMMPfam db_id=PF07977 from=11 to=134 evalue=3.8e-26 interpro_id=IPR013114 interpro_description=Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase, FabA/FabZ)
ACD75_191_25

Not on your lists

comp(24186..24935)
DNA (750bp) protein (250aa)
3-oxoacyl-ACP reductase
3-oxoacyl-ACP reductase
Probable 3-oxoacyl-[acyl-carrier protein] reductase n=1 Tax=Desulfotalea psychrophila RepID=Q6AKI9_DESPS (db=UNIREF evalue=6.0e-84 bit_score=313.0 identity=69.81 coverage=84.4)
seg (db=Seg db_id=seg from=14 to=37)
ACD75_191_26

Not on your lists

comp(24932..26338)
DNA (1407bp) protein (469aa)
Related to phytoene dehydrogenase n=1 Tax=Desulfotalea psychrophila RepID=Q6AKJ0_DESPS (db=UNIREF evalue=0.0 bit_score=785.0 identity=78.11 coverage=99.1471215351812)
phytoene dehydrogenase
phytoene dehydrogenase
transmembrane_regions (db=TMHMM db_id=tmhmm from=434 to=456)
ACD75_191_27

Not on your lists

comp(26395..27783)
DNA (1389bp) protein (463aa)
hypothetical protein
hypothetical protein
Putative uncharacterized protein n=1 Tax=Desulfotalea psychrophila RepID=Q6AKJ1_DESPS (db=UNIREF evalue=4.0e-145 bit_score=518.0 identity=59.55 coverage=94.6004319654428)
seg (db=Seg db_id=seg from=71 to=85)
ACD75_191_28

Not on your lists

comp(27788..28039)
DNA (252bp) protein (84aa)
acyl carrier protein
seg (db=Seg db_id=seg from=4 to=39)
no description (db=Gene3D db_id=G3DSA:1.10.1200.10 from=1 to=76 evalue=8.3e-16)
ACP-like (db=superfamily db_id=SSF47336 from=1 to=80 evalue=4.0e-14 interpro_id=IPR009081 interpro_description=Acyl carrier protein-like GO=Molecular Function: acyl carrier activity (GO:0000036))
ACD75_191_29

Not on your lists

comp(28190..29440)
DNA (1251bp) protein (417aa)
Related to 3-oxoacyl-[acyl-carrier-protein] synthase n=1 Tax=Desulfotalea psychrophila RepID=Q6AKJ3_DESPS (db=UNIREF evalue=0.0 bit_score=702.0 identity=79.85 coverage=98.5611510791367)
3-oxoacyl-ACP synthase rbh
3-oxoacyl-ACP synthase rbh
B_KETOACYL_SYNTHASE (db=PatternScan db_id=PS00606 from=157 to=173 evalue=0.0 interpro_id=IPR018201 interpro_description=Beta-ketoacyl synthase, active site)
ACD75_191_30

Not on your lists

comp(29649..30410)
DNA (762bp) protein (254aa)
hypothetical protein
seg (db=Seg db_id=seg from=224 to=241)
transmembrane_regions (db=TMHMM db_id=tmhmm from=224 to=241)
coiled-coil (db=Coil db_id=coil from=173 to=205 evalue=NA)
Displaying items 1-30 of 35 in total

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