| Value | Algorithm | Source | Identity | Coverage | Bit score | Evalue | Cross references |
|---|---|---|---|---|---|---|---|
| Sigma-54 dependent DNA-binding response regulator n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QAD3_DESAH (db=UNIREF evalue=7.0e-149 bit_score=531.0 identity=45.3 coverage=79.9721835883171) | similarity |
UNIREF
DB: UNIREF |
45.3 | 79.97 | 531 | 7.00e-149 | dat:HRM2_16090 |
| sigma-54 dependent DNA-binding response regulator | similarity |
KEGG
DB: KEGG |
44.4 | 604.0 | 517 | 6.30e-144 | dat:HRM2_16090 |
| SIGMA54_INTERACT_3 (db=PatternScan db_id=PS00688 from=622 to=631 evalue=0.0 interpro_id=IPR002078 interpro_description=RNA polymerase sigma factor 54, interaction GO=Molecular Function: ATP binding (GO:0005524), Cellular Component: intracellular (GO:0005622), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: transcription factor binding (GO:0008134)) | iprscan |
interpro
DB: PatternScan |
null | null | null | 0.0 | dat:HRM2_16090 |
| SIGMA54_INTERACT_1 (db=PatternScan db_id=PS00675 from=435 to=448 evalue=0.0 interpro_id=IPR002078 interpro_description=RNA polymerase sigma factor 54, interaction GO=Molecular Function: ATP binding (GO:0005524), Cellular Component: intracellular (GO:0005622), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: transcription factor binding (GO:0008134)) | iprscan |
interpro
DB: PatternScan |
null | null | null | 0.0 | dat:HRM2_16090 |
| P-loop containing nucleoside triphosphate hydrolases (db=superfamily db_id=SSF52540 from=410 to=649 evalue=9.2e-68) | iprscan |
interpro
DB: superfamily |
null | null | null | 9.20e-68 | dat:HRM2_16090 |
| no description (db=Gene3D db_id=G3DSA:3.40.50.300 from=409 to=583 evalue=2.6e-61) | iprscan |
interpro
DB: Gene3D |
null | null | null | 2.60e-61 | dat:HRM2_16090 |
| Sigma54_activat (db=HMMPfam db_id=PF00158 from=411 to=577 evalue=4.9e-60 interpro_id=IPR002078 interpro_description=RNA polymerase sigma factor 54, interaction GO=Molecular Function: ATP binding (GO:0005524), Cellular Component: intracellular (GO:0005622), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: transcription factor binding (GO:0008134)) | iprscan |
interpro
DB: HMMPfam |
null | null | null | 4.90e-60 | dat:HRM2_16090 |
| sensory_box: PAS domain S-box (db=HMMTigr db_id=TIGR00229 from=141 to=266 evalue=4.9e-17 interpro_id=IPR000014 interpro_description=PAS GO=Molecular Function: signal transducer activity (GO:0004871), Biological Process: signal transduction (GO:0007165)) | iprscan |
interpro
DB: HMMTigr |
null | null | null | 4.90e-17 | dat:HRM2_16090 |
| PYP-like sensor domain (PAS domain) (db=superfamily db_id=SSF55785 from=130 to=255 evalue=6.0e-17) | iprscan |
interpro
DB: superfamily |
null | null | null | 6.00e-17 | dat:HRM2_16090 |
| SENSORY TRANSDUCTION HISTIDINE KINASE (db=HMMPanther db_id=PTHR23283:SF8 from=13 to=681 evalue=6.8e-17) | iprscan |
interpro
DB: HMMPanther |
null | null | null | 6.80e-17 | dat:HRM2_16090 |
| SENSOR HISTIDINE KINASE-RELATED (db=HMMPanther db_id=PTHR23283 from=13 to=681 evalue=6.8e-17) | iprscan |
interpro
DB: HMMPanther |
null | null | null | 6.80e-17 | dat:HRM2_16090 |
| PYP-like sensor domain (PAS domain) (db=superfamily db_id=SSF55785 from=22 to=136 evalue=4.0e-16) | iprscan |
interpro
DB: superfamily |
null | null | null | 4.00e-16 | dat:HRM2_16090 |
| no description (db=Gene3D db_id=G3DSA:3.30.450.20 from=133 to=257 evalue=2.5e-14) | iprscan |
interpro
DB: Gene3D |
null | null | null | 2.50e-14 | dat:HRM2_16090 |
| Homeodomain-like (db=superfamily db_id=SSF46689 from=622 to=713 evalue=5.0e-14 interpro_id=IPR009057 interpro_description=Homeodomain-like) | iprscan |
interpro
DB: superfamily |
null | null | null | 5.00e-14 | dat:HRM2_16090 |
| sensory_box: PAS domain S-box (db=HMMTigr db_id=TIGR00229 from=13 to=140 evalue=7.1e-14 interpro_id=IPR000014 interpro_description=PAS GO=Molecular Function: signal transducer activity (GO:0004871), Biological Process: signal transduction (GO:0007165)) | iprscan |
interpro
DB: HMMTigr |
null | null | null | 7.10e-14 | dat:HRM2_16090 |
| no description (db=Gene3D db_id=G3DSA:1.10.8.60 from=584 to=657 evalue=1.8e-12) | iprscan |
interpro
DB: Gene3D |
null | null | null | 1.80e-12 | dat:HRM2_16090 |
| no description (db=Gene3D db_id=G3DSA:3.30.450.20 from=9 to=131 evalue=2.2e-12) | iprscan |
interpro
DB: Gene3D |
null | null | null | 2.20e-12 | dat:HRM2_16090 |
| HTH_8 (db=HMMPfam db_id=PF02954 from=672 to=711 evalue=7.5e-11 interpro_id=IPR002197 interpro_description=Helix-turn-helix, Fis-type GO=Molecular Function: transcription factor activity (GO:0003700), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) | iprscan |
interpro
DB: HMMPfam |
null | null | null | 7.50e-11 | dat:HRM2_16090 |
| no description (db=HMMSmart db_id=SM00382 from=431 to=578 evalue=3.5e-10 interpro_id=IPR003593 interpro_description=ATPase, AAA+ type, core GO=Molecular Function: nucleotide binding (GO:0000166), Molecular Function: nucleoside-triphosphatase activity (GO:0017111)) | iprscan |
interpro
DB: HMMSmart |
null | null | null | 3.50e-10 | dat:HRM2_16090 |
| PAS (db=HMMPfam db_id=PF00989 from=18 to=130 evalue=2.0e-07 interpro_id=IPR013767 interpro_description=PAS fold GO=Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) | iprscan |
interpro
DB: HMMPfam |
null | null | null | 2.00e-07 | dat:HRM2_16090 |
| no description (db=HMMSmart db_id=SM00091 from=145 to=213 evalue=2.3e-07 interpro_id=IPR000014 interpro_description=PAS GO=Molecular Function: signal transducer activity (GO:0004871), Biological Process: signal transduction (GO:0007165)) | iprscan |
interpro
DB: HMMSmart |
null | null | null | 2.30e-07 | dat:HRM2_16090 |
| PYP-like sensor domain (PAS domain) (db=superfamily db_id=SSF55785 from=256 to=373 evalue=6.0e-06) | iprscan |
interpro
DB: superfamily |
null | null | null | 6.00e-06 | dat:HRM2_16090 |
| HTHFIS (db=FPrintScan db_id=PR01590 from=694 to=714 evalue=1.9e-05 interpro_id=IPR020441 interpro_description=Helix-turn-helix, Fis GO=Molecular Function: transcription factor activity (GO:0003700), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) | iprscan |
interpro
DB: FPrintScan |
null | null | null | 1.90e-05 | dat:HRM2_16090 |
| HTHFIS (db=FPrintScan db_id=PR01590 from=677 to=694 evalue=1.9e-05 interpro_id=IPR020441 interpro_description=Helix-turn-helix, Fis GO=Molecular Function: transcription factor activity (GO:0003700), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) | iprscan |
interpro
DB: FPrintScan |
null | null | null | 1.90e-05 | dat:HRM2_16090 |
| no description (db=Gene3D db_id=G3DSA:1.10.1680.10 from=670 to=713 evalue=0.00024) | iprscan |
interpro
DB: Gene3D |
null | null | null | 2.40e-04 | dat:HRM2_16090 |
| no description (db=HMMSmart db_id=SM00086 from=91 to=133 evalue=0.013 interpro_id=IPR001610 interpro_description=PAC motif GO=Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Biological Process: signal transduction (GO:0007165)) | iprscan |
interpro
DB: HMMSmart |
null | null | null | 1.30e-02 | dat:HRM2_16090 |
| no description (db=HMMSmart db_id=SM00091 from=17 to=86 evalue=1.4 interpro_id=IPR000014 interpro_description=PAS GO=Molecular Function: signal transducer activity (GO:0004871), Biological Process: signal transduction (GO:0007165)) | iprscan |
interpro
DB: HMMSmart |
null | null | null | 1.40e+00 | dat:HRM2_16090 |
| PAC (db=ProfileScan db_id=PS50113 from=335 to=386 evalue=8.541 interpro_id=IPR000700 interpro_description=PAS-associated, C-terminal GO=Molecular Function: two-component sensor activity (GO:0000155), Biological Process: two-component signal transduction system (phosphorelay) (GO:0000160)) | iprscan |
interpro
DB: ProfileScan |
null | null | null | 8.54e+00 | dat:HRM2_16090 |
| PAC (db=ProfileScan db_id=PS50113 from=90 to=142 evalue=12.235 interpro_id=IPR000700 interpro_description=PAS-associated, C-terminal GO=Molecular Function: two-component sensor activity (GO:0000155), Biological Process: two-component signal transduction system (phosphorelay) (GO:0000160)) | iprscan |
interpro
DB: ProfileScan |
null | null | null | 1.22e+01 | dat:HRM2_16090 |
| PAS (db=ProfileScan db_id=PS50112 from=143 to=206 evalue=13.065 interpro_id=IPR000014 interpro_description=PAS GO=Molecular Function: signal transducer activity (GO:0004871), Biological Process: signal transduction (GO:0007165)) | iprscan |
interpro
DB: ProfileScan |
null | null | null | 1.31e+01 | dat:HRM2_16090 |
| SIGMA54_INTERACT_4 (db=ProfileScan db_id=PS50045 from=411 to=638 evalue=59.292 interpro_id=IPR002078 interpro_description=RNA polymerase sigma factor 54, interaction GO=Molecular Function: ATP binding (GO:0005524), Cellular Component: intracellular (GO:0005622), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: transcription factor binding (GO:0008134)) | iprscan |
interpro
DB: ProfileScan |
null | null | null | 5.93e+01 | dat:HRM2_16090 |
| no description (db=HMMSmart db_id=SM00086 from=221 to=259 evalue=140.0 interpro_id=IPR001610 interpro_description=PAC motif GO=Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Biological Process: signal transduction (GO:0007165)) | iprscan |
interpro
DB: HMMSmart |
null | null | null | 1.40e+02 | dat:HRM2_16090 |
| Sigma-54 dependent DNA-binding response regulator {ECO:0000313|EMBL:EKD35784.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;" |
UNIPROT
DB: UniProtKB |
100.0 | 718.0 | 1428 | 0.0 | K1ZCZ9_9BACT |
Please be patient. You will receive a progress update momentarily.
