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ACD75_817

Alias: ACD75_5712.8220.35

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD75_817_1

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3..863
DNA (861bp) protein (287aa)
NADH dehydrogenase subunit G
NADH dehydrogenase subunit G
MOLYBDOPTERIN_PROK_1 (db=PatternScan db_id=PS00551 from=159 to=177 evalue=0.0 interpro_id=IPR006655 interpro_description=Molybdopterin oxidoreductase, prokaryotic, conserved site GO=Molecular Function: electron carrier activity (GO:0009055), Molecular Function: oxidoreductase activity (GO:0016491))
4FE4S_FER_1 (db=PatternScan db_id=PS00198 from=125 to=136 evalue=0.0 interpro_id=IPR017900 interpro_description=4Fe-4S ferredoxin, iron-sulphur binding, conserved site GO=Molecular Function: electron carrier activity (GO:0009055), Molecular Function: iron-sulfur cluster binding (GO:0051536))
ACD75_817_2

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comp(1001..1279)
DNA (279bp) protein (93aa)
1001..1279 - (rbs_motif=GGxGG rbs_spacer=5-10bp)
Uncharacterized protein {ECO:0000313|EMBL:EKD35789.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD75_817_3

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comp(1581..1760)
DNA (180bp) protein (60aa)
1581..1760 - (rbs_motif=None rbs_spacer=None)
Uncharacterized protein {ECO:0000313|EMBL:EKD35790.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD75_817_4

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1932..2558
DNA (627bp) protein (209aa)
Formate dehydrogenase subunit alpha
Formate dehydrogenase, alpha subunit n=1 Tax=Thermincola sp. JR RepID=D5XDG0_9FIRM (db=UNIREF evalue=1.0e-54 bit_score=215.0 identity=51.22 coverage=96.6507177033493)
ADC-like (db=superfamily db_id=SSF50692 from=53 to=203 evalue=3.2e-49 interpro_id=IPR009010 interpro_description=Aspartate decarboxylase-like fold GO=Molecular Function: binding (GO:0005488))
NITRATE, FROMATE, IRON DEHYDROGENASE (db=HMMPanther db_id=PTHR11615 from=1 to=204 evalue=8.0e-49)
cytoplasmic kelly wrighton (12/4/12)
ACD75_817_5

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3079..3381
DNA (303bp) protein (101aa)
seg (db=Seg db_id=seg from=3 to=20)
Uncharacterized protein {ECO:0000313|EMBL:EKD35781.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD75_817_6

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3481..4152
DNA (672bp) protein (224aa)
seg (db=Seg db_id=seg from=68 to=80)
seg (db=Seg db_id=seg from=95 to=110)
Uncharacterized protein {ECO:0000313|EMBL:EKD35782.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD75_817_7

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4165..4353
DNA (189bp) protein (63aa)
4165..4353 + (rbs_motif=None rbs_spacer=None)
Uncharacterized protein {ECO:0000313|EMBL:EKD35783.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD75_817_8

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comp(4626..6782)
DNA (2157bp) protein (719aa)
Sigma-54 dependent DNA-binding response regulator n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QAD3_DESAH (db=UNIREF evalue=7.0e-149 bit_score=531.0 identity=45.3 coverage=79.9721835883171)
sigma-54 dependent DNA-binding response regulator
SIGMA54_INTERACT_3 (db=PatternScan db_id=PS00688 from=622 to=631 evalue=0.0 interpro_id=IPR002078 interpro_description=RNA polymerase sigma factor 54, interaction GO=Molecular Function: ATP binding (GO:0005524), Cellular Component: intracellular (GO:0005622), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: transcription factor binding (GO:0008134))
SIGMA54_INTERACT_1 (db=PatternScan db_id=PS00675 from=435 to=448 evalue=0.0 interpro_id=IPR002078 interpro_description=RNA polymerase sigma factor 54, interaction GO=Molecular Function: ATP binding (GO:0005524), Cellular Component: intracellular (GO:0005622), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: transcription factor binding (GO:0008134))
ACD75_817_9

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comp(6819..7364)
DNA (546bp) protein (182aa)
tryptophan synthase beta chain like (EC:4.2.1.20)
seg (db=Seg db_id=seg from=89 to=102)
seg (db=Seg db_id=seg from=32 to=44)
RmlC-like cupins (db=superfamily db_id=SSF51182 from=50 to=139 evalue=1.1e-06 interpro_id=IPR011051 interpro_description=Cupin, RmlC-type)
ACD75_817_10

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comp(7361..7951)
DNA (591bp) protein (197aa)
nudC; protein NudC (EC:3.6.1.22)
NUDIX_BOX (db=PatternScan db_id=PS00893 from=98 to=119 evalue=0.0 interpro_id=IPR020084 interpro_description=NUDIX hydrolase, conserved site GO=Molecular Function: hydrolase activity (GO:0016787))
Nudix (db=superfamily db_id=SSF55811 from=15 to=188 evalue=9.6e-44 interpro_id=IPR015797 interpro_description=NUDIX hydrolase domain-like GO=Molecular Function: hydrolase activity (GO:0016787))
no description (db=Gene3D db_id=G3DSA:3.90.79.10 from=69 to=183 evalue=1.6e-25 interpro_id=IPR000086 interpro_description=NUDIX hydrolase domain GO=Molecular Function: hydrolase activity (GO:0016787))
ACD75_817_11

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8084..8272
DNA (189bp) protein (63aa)
8084..8272 + (rbs_motif=GGA/GAG/AGG rbs_spacer=5-10bp)
Uncharacterized protein {ECO:0000313|EMBL:EKD35780.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Displaying 11 items

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