ggKbase home page

gwa2_scaffold_3166

Alias: GWA2_OD1_49_20_two_genomes_8

Search features with annotation key words

Displaying items 1-30 of 78 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
gwa2_scaffold_3166_1
GWA2_OD1_47_21_part, Parcubacteria, Bacteria

Not on your lists

1..108
-----------------
DNA (108bp)
protein (36aa)
hypothetical protein Tax=GWA2_OD1_47_21_part
gwa2_scaffold_3166_2
GWA2_OD1_47_21_part, Parcubacteria, Bacteria

Not on your lists

341..913
-----------------
DNA (573bp)
protein (191aa)
hypothetical protein Tax=GWA2_OD1_47_21_part
gwa2_scaffold_3166_3
GWA2_OD1_47_21_part, Parcubacteria, Bacteria

Not on your lists

comp(1297..1998)
-----------------
DNA (702bp)
protein (234aa)
trmD; tRNA (guanine-1-)-methyltransferase (EC:2.1.1.31)
tRNA (Guanine-N(1)-)-methyltransferase {ECO:0000313|EMBL:KKU70441.1}; TaxID=1618843 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_47_21.;"
tRNA (guanine-N(1)-)-methyltransferase
gwa2_scaffold_3166_4
GWA2_OD1_47_21_part, Parcubacteria, Bacteria

Not on your lists

comp(2077..2958)
-----------------
DNA (882bp)
protein (294aa)
pheA1; bifunctional chorismate mutase/prephenate dehydratase PheA1 (EC:4.2.1.51 5.4.99.5)
Bifunctional chorismate mutase/ prephenate dehydratase PheA1 Tax=GWA2_OD1_47_21_part
Bifunctional chorismate mutase/ prephenate dehydratase PheA1
gwa2_scaffold_3166_5
GWA2_OD1_47_21_part, Parcubacteria, Bacteria

Not on your lists

comp(3228..3539)
-----------------
DNA (312bp)
protein (104aa)
UPF0109 protein LDC_0451 Tax=GWA2_OD1_47_21_part
hypothetical protein
UPF0109 protein LDC_0451
gwa2_scaffold_3166_6
GWA2_OD1_47_21_part, Parcubacteria, Bacteria

Not on your lists


comp(3665..4093)
-----------------
DNA (429bp)
protein (143aa)
30S ribosomal protein S16 Tax=GWA2_OD1_47_21_part
30S ribosomal protein S16
30S ribosomal protein S16
gwa2_scaffold_3166_7
GWA2_OD1_47_21_part, Parcubacteria, Bacteria

Not on your lists

4235..5605
-----------------
DNA (1371bp)
protein (457aa)
hypothetical protein CCH26_01035 Tax=GWA2_OD1_47_21_part
hypothetical protein
hypothetical protein CCH26_01035
gwa2_scaffold_3166_8
GWA2_OD1_47_21_part, Parcubacteria, Bacteria

Not on your lists

5888..6661
-----------------
DNA (774bp)
protein (258aa)
Putative hydrolase or acyltransferase of alpha/beta superfamily Tax=GWA2_OD1_47_21_part
alpha/beta hydrolase fold protein
Putative hydrolase or acyltransferase of alpha/beta superfamily
gwa2_scaffold_3166_9
GWA2_OD1_47_21_part, Parcubacteria, Bacteria

Not on your lists

comp(6763..7977)
-----------------
DNA (1215bp)
protein (405aa)
RNA polymerase sigma factor {ECO:0000313|EMBL:KKU70447.1}; TaxID=1618843 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_47_21.;"
RNA polymerase, sigma 70 subunit, rpod subfamily
RNA polymerase sigma factor
gwa2_scaffold_3166_10
GWA2_OD1_47_21_part, Parcubacteria, Bacteria

Not on your lists

comp(8024..9706)
-----------------
DNA (1683bp)
protein (561aa)
DNA primase Tax=GWA2_OD1_47_21_part
DNA primase
DNA primase
gwa2_scaffold_3166_11
GWA2_OD1_47_21_part, Parcubacteria, Bacteria

Not on your lists

comp(9732..13466)
-----------------
DNA (3735bp)
protein (1245aa)
DNA-directed RNA polymerase subunit beta' (EC:2.7.7.6)
DNA-directed RNA polymerase subunit beta {ECO:0000313|EMBL:KKU70449.1}; TaxID=1618843 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_47_21.;"
DNA-directed RNA polymerase subunit beta'
gwa2_scaffold_3166_12
GWA2_OD1_47_21_part, Parcubacteria, Bacteria

Not on your lists

comp(13559..16819)
-----------------
DNA (3261bp)
protein (1087aa)
DNA-directed RNA polymerase subunit beta (EC:2.7.7.6)
DNA-directed RNA polymerase subunit beta {ECO:0000313|EMBL:KKU70450.1}; TaxID=1618843 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_47_21.;"
DNA-directed RNA polymerase subunit beta
gwa2_scaffold_3166_13
GWA2_OD1_47_21_part, Parcubacteria, Bacteria

Not on your lists

17633..18076
-----------------
DNA (444bp)
protein (148aa)
Response regulator receiver domain protein Tax=GWA2_OD1_47_21_part
Response regulator receiver domain protein
gwa2_scaffold_3166_14
GWA2_OD1_47_21_part, Parcubacteria, Bacteria

Not on your lists

18470..19696
-----------------
DNA (1227bp)
protein (409aa)
hypothetical protein Tax=GWA2_OD1_47_21_part
gwa2_scaffold_3166_15
GWA2_OD1_47_21_part, Parcubacteria, Bacteria

Not on your lists

19693..20907
-----------------
DNA (1215bp)
protein (405aa)
hypothetical protein Tax=GWA2_OD1_47_21_part
gwa2_scaffold_3166_16
GWA2_OD1_47_21_part, Parcubacteria, Bacteria

Not on your lists

21073..22563
-----------------
DNA (1491bp)
protein (497aa)
Putative uncharacterized protein Tax=GWA2_OD1_47_21_part
spermine synthase
Putative uncharacterized protein
gwa2_scaffold_3166_17
GWA2_OD1_47_21_part, Parcubacteria, Bacteria

Not on your lists

comp(22795..23847)
-----------------
DNA (1053bp)
protein (351aa)
Fic family protein Tax=GWA2_OD1_47_21_part
hypothetical protein
Fic family protein
gwa2_scaffold_3166_18
GWA2_OD1_47_21_part, Parcubacteria, Bacteria

Not on your lists

comp(24060..24401)
-----------------
DNA (342bp)
protein (114aa)
Putative uncharacterized protein Tax=GWA2_OD1_47_21_part
hypothetical protein
Putative uncharacterized protein
gwa2_scaffold_3166_19
GWA2_OD1_47_21_part, Parcubacteria, Bacteria

Not on your lists

comp(24388..24687)
-----------------
DNA (300bp)
protein (100aa)
Polymerase beta domain protein region protein {ECO:0000313|EMBL:KKU70457.1}; TaxID=1618843 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_47_21.;"
DNA polymerase beta domain-containing protein
DNA polymerase beta domain protein region
gwa2_scaffold_3166_20
GWA2_OD1_47_21_part, Parcubacteria, Bacteria

Not on your lists

comp(25031..25540)
-----------------
DNA (510bp)
protein (170aa)
hypothetical protein Tax=GWA2_OD1_47_21_part
gwa2_scaffold_3166_21
GWA2_OD1_47_21_part, Parcubacteria, Bacteria

Not on your lists

comp(25677..26204)
-----------------
DNA (528bp)
protein (176aa)
hypothetical protein Tax=GWA2_OD1_47_21_part
gwa2_scaffold_3166_22
GWA2_OD1_47_21_part, Parcubacteria, Bacteria

Not on your lists

comp(26348..26755)
-----------------
DNA (408bp)
protein (136aa)
hypothetical protein Tax=GWA2_OD1_47_21_part
gwa2_scaffold_3166_23
GWA2_OD1_47_21_part, Parcubacteria, Bacteria

Not on your lists

comp(27026..27145)
-----------------
DNA (120bp)
protein (40aa)
hypothetical protein Tax=GWA2_OD1_47_21_part
gwa2_scaffold_3166_24
GWA2_OD1_47_21_part, Parcubacteria, Bacteria

Not on your lists

comp(27179..27550)
-----------------
DNA (372bp)
protein (124aa)
hypothetical protein Tax=GWA2_OD1_47_21_part
gwa2_scaffold_3166_25
GWA2_OD1_47_21_part, Parcubacteria, Bacteria

Not on your lists

comp(27573..27998)
-----------------
DNA (426bp)
protein (142aa)
hypothetical protein Tax=GWA2_OD1_47_21_part
gwa2_scaffold_3166_26
GWA2_OD1_47_21_part, Parcubacteria, Bacteria

Not on your lists

comp(28020..28445)
-----------------
DNA (426bp)
protein (142aa)
Putative uncharacterized protein Tax=GWA2_OD1_47_21_part
hypothetical protein
Putative uncharacterized protein
gwa2_scaffold_3166_27
GWA2_OD1_47_21_part, Parcubacteria, Bacteria

Not on your lists

comp(28462..28869)
-----------------
DNA (408bp)
protein (136aa)
DNA polymerase beta domain protein region Tax=GWA2_OD1_47_21_part
DNA polymerase beta domain-containing protein region
DNA polymerase beta domain protein region
gwa2_scaffold_3166_28
GWA2_OD1_47_21_part, Parcubacteria, Bacteria

Not on your lists

comp(29023..29451)
-----------------
DNA (429bp)
protein (143aa)
Putative uncharacterized protein Tax=GWA2_OD1_47_21_part
hypothetical protein
Putative uncharacterized protein
gwa2_scaffold_3166_29
GWA2_OD1_47_21_part, Parcubacteria, Bacteria

Not on your lists

comp(29493..29981)
-----------------
DNA (489bp)
protein (163aa)
Putative uncharacterized protein Tax=GWA2_OD1_47_21_part
Putative uncharacterized protein
gwa2_scaffold_3166_30
GWA2_OD1_47_21_part, Parcubacteria, Bacteria

Not on your lists

comp(29986..30252)
-----------------
DNA (267bp)
protein (89aa)
Xre family transcriptional regulator Tax=GWA2_OD1_47_21_part
Xre family transcriptional regulator
Xre family transcriptional regulator
Displaying items 1-30 of 78 in total

View Taxonomy