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ACD76_24_2

Organism: ACD76

near complete RP 48 / 55 MC: 10 BSCG 44 / 51 MC: 2 ASCG 0 / 38
Location: comp(1258..1839)

Top 3 Functional Annotations

Value Algorithm Source
ECF subfamily RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 27.7
  • Coverage: 173.0
  • Bit_score: 86
  • Evalue 7.40e-15
sigma70-ECF: RNA polymerase sigma factor, (db=HMMTigr db_id=TIGR02937 from=20 to=178 evalue=7.0e-29 interpro_id=IPR014284 interpro_description=RNA polymerase sigma-70 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: transcription factor activity (GO:0003700), Biological Process: transcription initiation (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:0016987)) iprscan interpro
DB: HMMTigr
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 7.00e-29
Sigma2 domain of RNA polymerase sigma factors (db=superfamily db_id=SSF88946 from=14 to=87 evalue=2.1e-13 interpro_id=IPR013325 interpro_description=RNA polymerase sigma factor, region 2 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: transcription factor activity (GO:0003700), Biological Process: transcription initiation (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:0016987)) iprscan interpro
DB: superfamily
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 2.10e-13

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Taxonomy

uncultured bacterium → Bacteria

Sequences

DNA sequence
Length: 582
ATGAACAAGCAGCGCCAAACATACTTACTGTTCCGTATCAGAATGTATAAGGACCAAGACGCGTTTGCACAGCTCCACAAAGCATACTACGACCGCGTTTTTAGGTTCATATTGCTTAAAACGCCAACACGGCAAGATGCAGAGGACATAGCAAACGATACATTCGTGCGCTTGTGGCGATACATTACAACAACACCGGTTACAGAATTCACAGGGCTTGTTTACAAAATCTCACAGCGCACTATCGCGGCTTTTTACCGCGAGCGCGGGGTTGAGTCAGTAGAGCTTGACGAGAATGTTGTCCAGCTTTCACTGCCCGGTGCAAGTTCAATAGAAATGGAAGTTGATGCAGGGCTTCAAAAAGATAAACTGCTCTATTTAATCGGAAAGTTAAAAGATGAATACAAAGACGCGCTTTTCATGCGGTATGTAGAGCAGATGTCAGTGGCGGAAATCGCAGAAGCGCTTGATAAGCGGGCAGGGGGTGTAAGAGTATTGTTGCATAGAGCAAAAAAAGCATTACACAATATAATTGAAGAAAATGAGACAGTTGGAAAAACAATTAAAGAATTTGATAAATGA
PROTEIN sequence
Length: 194
MNKQRQTYLLFRIRMYKDQDAFAQLHKAYYDRVFRFILLKTPTRQDAEDIANDTFVRLWRYITTTPVTEFTGLVYKISQRTIAAFYRERGVESVELDENVVQLSLPGASSIEMEVDAGLQKDKLLYLIGKLKDEYKDALFMRYVEQMSVAEIAEALDKRAGGVRVLLHRAKKALHNIIEENETVGKTIKEFDK*