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RBG_16_scaffold_6103

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Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RBG_16_scaffold_6103_1
RBG_16_OP11_Gottesmanbacteria_37_8_curated, Gottesmanbacteria, Microgenomates, Bacteria

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2..442
-----------------
DNA (441bp)
protein (147aa)
Uncharacterized protein n=1 Tax=uncultured bacterium (gcode 4) RepID=K1XK35_9BACT
hypothetical protein Tax=RBG_16_OP11_Gottesmanbacteria_37_8_curated
hypothetical protein
RBG_16_scaffold_6103_2
RBG_16_OP11_Gottesmanbacteria_37_8_curated, Gottesmanbacteria, Microgenomates, Bacteria

Not on your lists

444..608
-----------------
DNA (165bp)
protein (55aa)
id=5084201 Tax=RBG_16_OP11_Gottesmanbacteria_37_8_curated
alias=gwa2_scaffold_51_59 id=5084201 tax=GWA2_OP11 organism_desc=RuBisCO project
RBG_16_scaffold_6103_trna_1
unknown

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703..774
-----------------
DNA (72bp)
transferRNA
RBG_16_scaffold_6103_trna_2
unknown

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798..879
-----------------
DNA (82bp)
transferRNA
RBG_16_scaffold_6103_trna_3
unknown

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891..972
-----------------
DNA (82bp)
transferRNA
RBG_16_scaffold_6103_3
RBG_16_OP11_Gottesmanbacteria_37_8_curated, Gottesmanbacteria, Microgenomates, Bacteria

Not on your lists

comp(986..2098)
-----------------
DNA (1113bp)
protein (371aa)
small GTP-binding protein; K03665 GTP-binding protein HflX Tax=RBG_16_OP11_Gottesmanbacteria_37_8_curated
Putative GTP-binding protein ynbA alias=gwa2_scaffold_51_56 id=5084198 tax=GWA2_OP11 species=Crassostrea gigas genus=Crassostrea taxon_order=Ostreoida taxon_class=Bivalvia phylum=Mollusca organism_desc=RuBisCO project rbh
hypothetical protein
RBG_16_scaffold_6103_trna_9
unknown

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comp(2151..2221)
-----------------
DNA (71bp)
transferRNA
RBG_16_scaffold_6103_trna_4
unknown

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2273..2344
-----------------
DNA (72bp)
transferRNA
RBG_16_scaffold_6103_trna_5
unknown

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2383..2455
-----------------
DNA (73bp)
transferRNA
RBG_16_scaffold_6103_4
RBG_16_OP11_Gottesmanbacteria_37_8_curated, Gottesmanbacteria, Microgenomates, Bacteria

Not on your lists

2493..3122
-----------------
DNA (630bp)
protein (210aa)
hypothetical protein Tax=RBG_16_OP11_Gottesmanbacteria_37_8_curated
ErfK/YbiS/YcfS/YnhG family protein alias=gwa2_scaffold_993_73 id=5085248 tax=GWA2_OP11 organism_desc=RuBisCO project rbh
hypothetical protein
RBG_16_scaffold_6103_trna_6
unknown

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3152..3223
-----------------
DNA (72bp)
transferRNA
RBG_16_scaffold_6103_5
RBG_16_OP11_Gottesmanbacteria_37_8_curated, Gottesmanbacteria, Microgenomates, Bacteria

Not on your lists

3255..4652
-----------------
DNA (1398bp)
protein (466aa)
Tax=RBG_16_OP11_Gottesmanbacteria_37_8_curated
RBG_16_scaffold_6103_6
RBG_16_OP11_Gottesmanbacteria_37_8_curated, Gottesmanbacteria, Microgenomates, Bacteria

Not on your lists

comp(4707..5075)
-----------------
DNA (369bp)
protein (123aa)
hypothetical protein Tax=RBG_16_OP11_Gottesmanbacteria_37_8_curated
response regulator receiver protein alias=ACD56_C00069G00010,ACD56p_8017.11380.16_10,ACD56p_8017.11380.16G0010 id=84696 tax=ACD56 species=Natranaerobius thermophilus genus=Natranaerobius taxon_order=Natranaerobiales taxon_class=Clostridia phylum=Firmicutes organism_group=OD1-i organism_desc=OD1-i
hypothetical protein
RBG_16_scaffold_6103_7
RBG_16_OP11_Gottesmanbacteria_37_8_curated, Gottesmanbacteria, Microgenomates, Bacteria

Not on your lists

comp(5117..6598)
-----------------
DNA (1482bp)
protein (494aa)
PAS/PAC sensor signal transduction histidine kinase (EC:2.7.13.3); K07636 two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] Tax=RBG_16_OP11_Gottesmanbacte
PAS/PAC sensor signal transduction histidine kinase (EC:2.7.13.3)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1Z2T0_9BACT
RBG_16_scaffold_6103_trna_7
unknown

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6735..6806
-----------------
DNA (72bp)
transferRNA
RBG_16_scaffold_6103_8
RBG_16_OP11_Gottesmanbacteria_37_8_curated, Gottesmanbacteria, Microgenomates, Bacteria

Not on your lists

comp(6812..8029)
-----------------
DNA (1218bp)
protein (406aa)
hypothetical protein; K02004 putative ABC transport system permease protein Tax=RBG_16_OP11_Gottesmanbacteria_37_8_curated
ABC transporter, permease protein alias=gwa2_scaffold_51_45 id=5084187 tax=GWA2_OP11 species=Dictyoglomus thermophilum genus=Dictyoglomus taxon_order=Dictyoglomales taxon_class=Dictyoglomia phylum=Dictyoglomi organism_desc=RuBisCO project rbh
hypothetical protein
RBG_16_scaffold_6103_9
RBG_16_OP11_Gottesmanbacteria_37_8_curated, Gottesmanbacteria, Microgenomates, Bacteria

Not on your lists

comp(8022..9227)
-----------------
DNA (1206bp)
protein (402aa)
hypothetical protein Tax=RBG_16_OP11_Gottesmanbacteria_37_8_curated
Uncharacterized protein alias=gwa2_scaffold_51_44 id=5084186 tax=GWA2_OP11 species=Pelosinus fermentans genus=Pelosinus taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes organism_desc=RuBisCO project
hypothetical protein
RBG_16_scaffold_6103_10
RBG_16_OP11_Gottesmanbacteria_37_8_curated, Gottesmanbacteria, Microgenomates, Bacteria

Not on your lists

comp(9227..9901)
-----------------
DNA (675bp)
protein (225aa)
macrolide export ATP-binding/permease protein MacB (EC:3.6.3.-); K02003 putative ABC transport system ATP-binding protein Tax=RBG_16_OP11_Gottesmanbacteria_37_8_curated
macrolide export ATP-binding/permease protein MacB (EC:3.6.3.-)
putative ABC transporter ATP-binding protein; K02003 putative ABC transport system ATP-binding protein alias=gwa2_scaffold_51_43 id=5084185 tax=GWA2_OP11 species=Caldisericum exile genus=Caldisericum taxon_order=Caldisericales taxon_class=Caldisericia phylum=Caldiserica organism_desc=RuBisCO project
RBG_16_scaffold_6103_11
RBG_16_OP11_Gottesmanbacteria_37_8_curated, Gottesmanbacteria, Microgenomates, Bacteria

Not on your lists

comp(9905..10120)
-----------------
DNA (216bp)
protein (72aa)
Efflux transporter, RND family, MFP subunit n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CE41_THET1
RND family efflux transporter MFP subunit
Tax=RBG_16_OP11_Gottesmanbacteria_37_8_curated
RBG_16_scaffold_6103_12
RBG_16_OP11_Gottesmanbacteria_37_8_curated, Gottesmanbacteria, Microgenomates, Bacteria

Not on your lists

comp(10096..10452)
-----------------
DNA (357bp)
protein (119aa)
acrA; membrane-fusion protein; K02005 HlyD family secretion protein Tax=RBG_16_OP11_Gottesmanbacteria_37_8_curated
acrA; membrane-fusion protein; K02005 HlyD family secretion protein alias=gwa2_scaffold_51_42 id=5084184 tax=GWA2_OP11 species=Synechococcus sp. genus=Synechococcus taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria organism_desc=RuBisCO project
RBG_16_scaffold_6103_trna_8
unknown

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comp(10995..11078)
-----------------
DNA (84bp)
transferRNA
RBG_16_scaffold_6103_13
RBG_16_OP11_Gottesmanbacteria_37_8_curated, Gottesmanbacteria, Microgenomates, Bacteria

Not on your lists

comp(11104..12438)
-----------------
DNA (1335bp)
protein (445aa)
putative ABC transporter substrate binding protein Tax=RBG_16_OP11_Gottesmanbacteria_37_8_curated
ABC-type dipeptide transport system, periplasmic component alias=gwa2_scaffold_51_40 id=5084182 tax=GWA2_OP11 species=Thermaerobacter subterraneus genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes organism_desc=RuBisCO project rbh
Extracellular solute-binding protein family 5
RBG_16_scaffold_6103_14
RBG_16_OP11_Gottesmanbacteria_37_8_curated, Gottesmanbacteria, Microgenomates, Bacteria

Not on your lists

comp(12441..12689)
-----------------
DNA (249bp)
protein (83aa)
preprotein translocase subunit SecG; K03075 preprotein translocase subunit SecG Tax=RBG_16_OP11_Gottesmanbacteria_37_8_curated
Preprotein translocase, SecG subunit alias=gwa2_scaffold_51_39 id=5084181 tax=GWA2_OP11 species=Ktedonobacter racemifer genus=Ktedonobacter taxon_order=Ktedonobacterales taxon_class=Ktedonobacteria phylum=Chloroflexi organism_desc=RuBisCO project
secG; preprotein translocase subunit SecG
RBG_16_scaffold_6103_15
RBG_16_OP11_Gottesmanbacteria_37_8_curated, Gottesmanbacteria, Microgenomates, Bacteria

Not on your lists

comp(12700..13695)
-----------------
DNA (996bp)
protein (332aa)
hypothetical protein Tax=RBG_16_OP11_Gottesmanbacteria_37_8_curated
hypothetical protein alias=gwa2_scaffold_51_38 id=5084180 tax=GWA2_OP11 species=Thermobaculum terrenum genus=Thermobaculum taxon_order=unknown taxon_class=unknown phylum=unknown organism_desc=RuBisCO project rbh
hypothetical protein
RBG_16_scaffold_6103_16
RBG_16_OP11_Gottesmanbacteria_37_8_curated, Gottesmanbacteria, Microgenomates, Bacteria

Not on your lists

comp(13790..14074)
-----------------
DNA (285bp)
protein (95aa)
id=5084179 Tax=RBG_16_OP11_Gottesmanbacteria_37_8_curated
alias=gwa2_scaffold_51_37 id=5084179 tax=GWA2_OP11 organism_desc=RuBisCO project
RBG_16_scaffold_6103_17
RBG_16_OP11_Gottesmanbacteria_37_8_curated, Gottesmanbacteria, Microgenomates, Bacteria

Not on your lists

comp(14109..15203)
-----------------
DNA (1095bp)
protein (365aa)
excinuclease ABC subunit C ; K03703 excinuclease ABC subunit C Tax=RBG_16_OP11_Gottesmanbacteria_37_8_curated
excinuclease ABC subunit C ; K03703 excinuclease ABC subunit C alias=gwa2_scaffold_51_36 id=5084178 tax=GWA2_OP11 organism_desc=RuBisCO project
Excinuclease ABC subunit C
Displaying 26 items

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