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NECEvent2014_2_3_scaffold_262_6

Organism: NECEvent2014_2_3_UNK

partial RP 8 / 55 BSCG 3 / 51 ASCG 2 / 38 MC: 1
Location: comp(3779..4198)

Top 3 Functional Annotations

Value Algorithm Source
Sigma-70, region 4 n=77 Tax=Firmicutes RepID=C0EE66_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 139.0
  • Bit_score: 285
  • Evalue 3.60e-74
Sigma-70 family RNA polymerase sigma factor {ECO:0000313|EMBL:EOI44396.1}; TaxID=1158636 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 139.0
  • Bit_score: 285
  • Evalue 5.00e-74
RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 70.3
  • Coverage: 138.0
  • Bit_score: 210
  • Evalue 3.20e-52

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Taxonomy

Enterococcus faecium → Enterococcus → Lactobacillales → Bacilli → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 420
ATGAAACCGTCTGACTTCCAAAAAACAATTCAGTGTCAGTTTGAATGTAAGCTGAAAAAAGTTGTCAAAGGTATTATCTGGAACTACCGTAAAGAATTAAAACGAAGAAAAAACAAGGAAATATCTTTTAGCGAATTACCAGACATTACGGTAGAAAGTCTGGCAACATGGGACGACTACGAAACAAACTACACAATTTTTAATGTGTGTGGCATAGATATTAAAGTCCTTGATGATGAACTTGCAGAAGCTCTCAAACAGCTACCCGAAAAAAAACGTAACAATGTATTGATGTATTACTTCTTGGAAATGAGCGATACAGAGATTGCAGATATTATGAATTATACCAGAGGGGCTGTGTTCAAACACAGACACCGTGCACTAGAAACTATGAAAGAGATACTTAAGGAGAAGAAATAG
PROTEIN sequence
Length: 140
MKPSDFQKTIQCQFECKLKKVVKGIIWNYRKELKRRKNKEISFSELPDITVESLATWDDYETNYTIFNVCGIDIKVLDDELAEALKQLPEKKRNNVLMYYFLEMSDTEIADIMNYTRGAVFKHRHRALETMKEILKEKK*