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ACD79_1_2

Organism: ACD79

partial RP 16 / 55 MC: 4 BSCG 15 / 51 MC: 2 ASCG 0 / 38
Location: comp(163..2025)

Top 3 Functional Annotations

Value Algorithm Source
ornithine decarboxylase inhibitor-putative sigma54 transciptional regulator n=1 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C585F (db=UNIREF evalue=9.0e-90 bit_score=335.0 identity=38.14 coverage=68.7600644122383) similarity UNIREF
DB: UNIREF
  • Identity: 38.14
  • Coverage: 68.76
  • Bit_score: 335
  • Evalue 9.00e-90
sigma-54 factor interaction domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 38.8
  • Coverage: 446.0
  • Bit_score: 319
  • Evalue 1.70e-84
SIGMA54_INTERACT_3 (db=PatternScan db_id=PS00688 from=520 to=529 evalue=0.0 interpro_id=IPR002078 interpro_description=RNA polymerase sigma factor 54, interaction GO=Molecular Function: ATP binding (GO:0005524), Cellular Component: intracellular (GO:0005622), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: transcription factor binding (GO:0008134)) iprscan interpro
DB: PatternScan
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 0.0

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Taxonomy

uncultured bacterium → Bacteria

Sequences

DNA sequence
Length: 1863
ATGTCTTTTTTAATGGGTAAATCAGGTGTGGTAAAAGGTTCTCTGTTAAAATTGGTTGAGGGTAAAAACCTTATTGGGCAGGATGATGGAAATTGTTTGATTTTATTGGAATCAAATCTGAATAAAAAGCCTCTTTTTGAGATTACGGTTTCAAATAATCACGTTAAAATTAATAATTTATCAAAAGAAAATATTTTTTTAAATGGCAATAATTTTGAAAAGGATTCTTTAAAAGAAAATGATGAAATTGAAATCAATTCAGATTTTTTCAGATATATCAGTGATGAGAAAAGCATAATTTCAACCGAAGACGGAACCTTATTTTTCTGCGAATCCGACCGTTTTATAATACTGGAAAATAAGGAGAAATTTAAAAATATTTCTGAAACAGAAAATAAAATTAAAGATTCTTTTTATGAAACTGGAAATATTTTAAATTCTTCAGGGAGCGCTAAAAGTTTTGTTGAAAATATTGATAATGTAATAGTAAAAAAATTTCCTGAATCTTCATTTTTATTTATTTTATGGGATGAAAAAGAAAGCGCTTTTGTTAAAATAAATAAAAATTCATCTGAAAAGTTCAATATAAGCCGGACTTTATTTTCAACTGTCTTATCTGAGAAAAAAGCAATATTGAGTCAGGATATATTTAAAGATTCCCGTTTTAGAAATATTGAAAGTCTGCATGGACAATCAATTAATTCTATAATGTGCGCCCCGCTTTTATCACATAGAGCAATACTGGGTATTATGTATGTTTCATTTTCTGATTTTTTGTATGAATTTAATAAAAATGATTTTGATTTTTTTTGTCGGTTAGCTTTTCAGGCTTCAATTGCGCTGGAAAATGTAATAACCAAAGAAAGTTTAAATAAAGAAAATAATACTTTAAGGAAAACAATAAACAGTGAAAGACCTTTTATCGGAAAAAGCGCAGCCATAGAAAAAATATTTAATTTGATTAAAAGAGTTGCTCCCACAGATTTAAATGTTCTTATCCGCGGAGAAACTGGCACAGGAAAAGAACTGGCCGCAAGAATGATTCATGACAACTCTCGCCGTAAAGATAATCCATTTATTTGTGTGAACTGCGCTGTTTTAAGTGAAAATCTTTTAGAGAGTGAATTGTTTGGGCATGTTAAAGGTGCCTTTACGGGAGCTTTAGAAAATAAAACAGGAAAATTGGAACAATCAGAGGGCGGAACATTATTTCTTGATGAAGTGGGGGAAATACCAATTAAAACTCAGGTAAAACTATTACGTTTTCTTCAGGAAAAAGAATTTGAGAAGGTTGGCAGCAATAAAAAAATTAAATTAAACGTAAGAATTATTTCTGCAACCAATTGTGATTTGGAAGAAGCAATAAAAGATAATTTGTTCCGCGAAGATTTTTATTACAGGCTTAAAAGTTTCAATATTTTAATGCCGCCATTAAGAATAAGAGTGGATGATATTCCAATGCTGGTGGATTTTTTTATTAAGCGGTTTTGTGAAGAAAATAATCGCATTGTTCCAACGGTTTCTAAGGATGCAATGGAAATCCTGCAAAATTATGGCTGGCCGGGAAATATCAGAGAGTTAAAAAATATAATTGAAGAATGCTTAGTGTTGAATATGGATTCAGTAATAAATAAGAATGATATTTTTTTAAGTGACTTTGGTTTGGGAGGGAAAGCTTGCGATAAGGGTAAGAATCTGTCTTTCAGAGAAGCTGTATTTCAATTTGAAAAAACATATTTTTCAGAGCTTATTAAAGATGCAGGCGGGAATATTACAAAAGCCTCGAAAATTTCTGAAATAGACAGAACTCATCTTCACAATAAATTAAAAAAATATGATATTAATCCTAATCAATATCGATAA
PROTEIN sequence
Length: 621
MSFLMGKSGVVKGSLLKLVEGKNLIGQDDGNCLILLESNLNKKPLFEITVSNNHVKINNLSKENIFLNGNNFEKDSLKENDEIEINSDFFRYISDEKSIISTEDGTLFFCESDRFIILENKEKFKNISETENKIKDSFYETGNILNSSGSAKSFVENIDNVIVKKFPESSFLFILWDEKESAFVKINKNSSEKFNISRTLFSTVLSEKKAILSQDIFKDSRFRNIESLHGQSINSIMCAPLLSHRAILGIMYVSFSDFLYEFNKNDFDFFCRLAFQASIALENVITKESLNKENNTLRKTINSERPFIGKSAAIEKIFNLIKRVAPTDLNVLIRGETGTGKELAARMIHDNSRRKDNPFICVNCAVLSENLLESELFGHVKGAFTGALENKTGKLEQSEGGTLFLDEVGEIPIKTQVKLLRFLQEKEFEKVGSNKKIKLNVRIISATNCDLEEAIKDNLFREDFYYRLKSFNILMPPLRIRVDDIPMLVDFFIKRFCEENNRIVPTVSKDAMEILQNYGWPGNIRELKNIIEECLVLNMDSVINKNDIFLSDFGLGGKACDKGKNLSFREAVFQFEKTYFSELIKDAGGNITKASKISEIDRTHLHNKLKKYDINPNQYR*