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NECEvent2014_2_3_scaffold_625_4

Organism: NECEvent2014_2_3_Actinomyces_HPA0247_66_505

near complete RP 52 / 55 MC: 2 BSCG 50 / 51 ASCG 15 / 38 MC: 1
Location: 2170..2832

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Atopobium sp. ICM58 RepID=J3J7C7_9ACTN similarity UNIREF
DB: UNIREF100
  • Identity: 96.4
  • Coverage: 220.0
  • Bit_score: 420
  • Evalue 1.50e-114
  • rbh
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=1105030 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. ICM58.; similarity UNIPROT
DB: UniProtKB
  • Identity: 96.4
  • Coverage: 220.0
  • Bit_score: 420
  • Evalue 2.10e-114
RNA polymerase sigma factor RpoE similarity KEGG
DB: KEGG
  • Identity: 62.4
  • Coverage: 194.0
  • Bit_score: 249
  • Evalue 9.80e-64

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Taxonomy

Atopobium sp. ICM58 → Atopobium → Coriobacteriales → Coriobacteriia → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 663
ATGGATGCAACAACCCCCCAACCAGCGGCGCAGGCGCCCGAGCCTGCCCCGGCCTCGTCGACCCCGGCCTCGTCGACCCCGGCCTCGTCGACCCCGGACGACGCGACGCTCCAGGCGCGCTTCATGGACGAAGCGATGCCCCTCATGAACCAACTGTTCGGCGCGGCCCTGGGTATGACCCGCAACCGAGCCGACGCGGAGGACCTGGTCCAGGAGACCTACCTCAAGGCCTACCAGAAGTTCCACCAGTACAAGCCCGGCACCAACATCAAGGCCTGGCTGTATCGAATCCTGACGAACACCTACATCACCGGCTACCGCAAGGAACAGCGTTCGCCCAAGCGTGCCTCCAGCGACACCGTCGAGGACTGGCAGCTCGCCGACGCCGCCTCCCACGCGGAGGTCGGCCTCAAATCCGCCGAAGTCGAAGCCCTCGAGGCGCTGCCCTCCACGCAGCTGCGCGAGGCCCTCGATTCGCTCTCAGAGGAACACCGGATGGTTGTCCTCATGGCTGACGTTGAAGGTATGAGCTACAAGGAAATCGCCGAAGAACTAGGAGTTCCCATGGGGACCGTCATGAGCCGACTGAACCGGGCGCGCAAGAACCTGCGCTCCGCACTGGCCGACGTCGCCGCGGAATACGGGATCGGAGGAGCCAAGTGA
PROTEIN sequence
Length: 221
MDATTPQPAAQAPEPAPASSTPASSTPASSTPDDATLQARFMDEAMPLMNQLFGAALGMTRNRADAEDLVQETYLKAYQKFHQYKPGTNIKAWLYRILTNTYITGYRKEQRSPKRASSDTVEDWQLADAASHAEVGLKSAEVEALEALPSTQLREALDSLSEEHRMVVLMADVEGMSYKEIAEELGVPMGTVMSRLNRARKNLRSALADVAAEYGIGGAK*