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NECEvent2014_2_3_scaffold_69

Alias: 172_003_scaffold_69

Search features with annotation key words

Displaying items 1-30 of 51 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_2_3_scaffold_69_1
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1..258
DNA (258bp) protein (86aa)
Hemagglutinin/adhesin {ECO:0000313|EMBL:CKH68728.1}; EC=3.5.1.28 {ECO:0000313|EMBL:CKH68728.1};; Putative hemagglutinin/adhesin cwpV {ECO:0000313|EMBL:CEJ97046.1}; TaxID=1496 species="Bacteria; Firmic
Cell wall binding repeat 2 family protein n=2 Tax=Clostridium difficile RepID=T3XG53_CLODI
cwpV; putative hemagglutinin/adhesin cwpV
NECEvent2014_2_3_scaffold_69_2
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(753..1997)
DNA (1245bp) protein (415aa)
Serine-type D-Ala-D-Ala carboxypeptidase n=34 Tax=Clostridium difficile RepID=G6BX62_CLODI rbh
D-alanyl-D-alanine carboxypeptidase
D-alanyl-D-alanine carboxypeptidase {ECO:0000313|EMBL:CBE02232.1}; TaxID=645463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostr
NECEvent2014_2_3_scaffold_69_3
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2040..4874)
DNA (2835bp) protein (945aa)
Sigma-54 interaction domain protein n=43 Tax=Clostridium difficile RepID=T3IE05_CLODC rbh
Transcription antiterminator
Transcription antiterminator {ECO:0000313|EMBL:CEJ97048.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium dif
NECEvent2014_2_3_scaffold_69_4
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5540..6337
DNA (798bp) protein (266aa)
Uncharacterized protein n=51 Tax=Clostridium difficile RepID=G6BX64_CLODI rbh
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:CBE02236.1}; TaxID=645463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium diff
NECEvent2014_2_3_scaffold_69_5
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6338..6832
DNA (495bp) protein (165aa)
Uncharacterized protein n=33 Tax=Clostridium difficile RepID=T3IDY8_CLODC rbh
putative membrane protein
Membrane spanning protein {ECO:0000313|EMBL:CKH68613.1}; Putative membrane protein {ECO:0000313|EMBL:CEJ97050.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococca
NECEvent2014_2_3_scaffold_69_6
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7058..8236
DNA (1179bp) protein (393aa)
Nucleoside recognition family protein n=125 Tax=Clostridium difficile RepID=T3ICM3_CLODC rbh
conserved hypothetical protein
Nucleoside recognition family protein {ECO:0000313|EMBL:EQE69549.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclo
NECEvent2014_2_3_scaffold_69_7
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8490..10097
DNA (1608bp) protein (536aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclos
His Kinase A domain protein n=193 Tax=Clostridium difficile RepID=C9XKG2_CLODC rbh
two-component sensor histidine kinase
NECEvent2014_2_3_scaffold_69_8
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10088..10792
DNA (705bp) protein (235aa)
Response regulator n=202 Tax=Clostridium difficile RepID=C9XKG3_CLODC rbh
two-component response regulator
Two-component response regulator {ECO:0000313|EMBL:CCL32229.1}; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostrid
NECEvent2014_2_3_scaffold_69_9
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10826..10939
DNA (114bp) protein (38aa)
Uncharacterized protein n=18 Tax=Clostridium difficile RepID=T2VW46_CLODI
Uncharacterized protein {ECO:0000313|EMBL:EQE69566.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium diffi
NECEvent2014_2_3_scaffold_69_10
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11079..11273)
DNA (195bp) protein (65aa)
Putative membrane protein n=3 Tax=Clostridium difficile RepID=T2V0C3_CLODI
conserved hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EHJ28337.1}; TaxID=997828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium diffic
NECEvent2014_2_3_scaffold_69_11
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11965..15063
DNA (3099bp) protein (1033aa)
Diguanylate cyclase domain protein n=24 Tax=Clostridium difficile RepID=T2U7H2_CLODI rbh
Putative signaling protein {ECO:0000313|EMBL:CEJ97055.1}; Signaling protein {ECO:0000313|EMBL:CKH68464.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; P
putative signaling protein
NECEvent2014_2_3_scaffold_69_12
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15186..16472
DNA (1287bp) protein (429aa)
Uncharacterized protein n=167 Tax=Clostridium difficile RepID=T3IIF9_CLODC rbh
putative transcriptional regulator
Uncharacterized protein {ECO:0000313|EMBL:EQG77556.1}; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium diffi
NECEvent2014_2_3_scaffold_69_13
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16851..17861)
DNA (1011bp) protein (337aa)
putative peptidase, M20 family (EC:3.4.11.-)
Putative peptidase, M20 family {ECO:0000313|EMBL:CAJ67358.1}; EC=3.4.11.- {ECO:0000313|EMBL:CAJ67358.1};; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae;
M42 glutamyl aminopeptidase family protein n=5 Tax=Clostridium difficile RepID=T2U4Z7_CLODI rbh
NECEvent2014_2_3_scaffold_69_14
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17896..19437)
DNA (1542bp) protein (514aa)
C4-dicarboxylate anaerobic carrier family protein n=145 Tax=Clostridium difficile RepID=T2TPM3_CLODI rbh
aminobenzoyl-glutamate transporter
Putative aminobenzoyl-glutamate transporter {ECO:0000313|EMBL:CBE02250.1}; TaxID=645463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Pep
NECEvent2014_2_3_scaffold_69_15
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19799..20545)
DNA (747bp) protein (249aa)
Metallo-beta-lactamase domain protein n=12 Tax=Clostridium difficile RepID=G6BX74_CLODI rbh
putative beta-lactamase-like hydrolase
Putative beta-lactamase-like hydrolase {ECO:0000313|EMBL:CAJ67360.1}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclo
NECEvent2014_2_3_scaffold_69_16
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20757..22067)
DNA (1311bp) protein (437aa)
Amidohydrolase n=13 Tax=Clostridium difficile RepID=G6BX75_CLODI rbh
putative amidohydrolase
Amidohydrolase {ECO:0000313|EMBL:CKH68278.1}; Putative amidohydrolase {ECO:0000313|EMBL:CEJ97060.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptocl
NECEvent2014_2_3_scaffold_69_17
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22080..22550)
DNA (471bp) protein (157aa)
Uncharacterized protein n=213 Tax=Clostridium difficile RepID=D5Q0B8_CLODI
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:CCL00456.1}; TaxID=1215061 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium dif
NECEvent2014_2_3_scaffold_69_18
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22554..23405)
DNA (852bp) protein (284aa)
Uncharacterized protein n=182 Tax=Clostridium difficile RepID=G6BX77_CLODI rbh
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:CCL32275.1}; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium dif
NECEvent2014_2_3_scaffold_69_19
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24329..25240
DNA (912bp) protein (304aa)
DeoR-family transcriptional regulator n=200 Tax=Clostridium difficile RepID=C9XKH2_CLODC rbh
DeoR family transcriptional regulator
DeoR-like helix-turn-helix domain protein {ECO:0000313|EMBL:EQG77747.1}; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Pept
NECEvent2014_2_3_scaffold_69_20
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25415..25912
DNA (498bp) protein (166aa)
GyrI-like small molecule binding domain protein n=43 Tax=Clostridium difficile RepID=T3IDE3_CLODC rbh
putative transcriptional regulator
AraC family transcriptional regulator {ECO:0000313|EMBL:CKH68156.1}; Putative transcriptional regulator {ECO:0000313|EMBL:CEJ97064.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridial
NECEvent2014_2_3_scaffold_69_21
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26656..27018
DNA (363bp) protein (121aa)
Chemotaxis protein CheY n=138 Tax=Clostridium difficile RepID=T3IBT8_CLODC
cheY; chemotaxis protein CheY
Chemotaxis protein {ECO:0000313|EMBL:CKH68113.1}; Chemotaxis protein CheY {ECO:0000313|EMBL:CEJ97065.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Pep
NECEvent2014_2_3_scaffold_69_22
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27179..27700
DNA (522bp) protein (174aa)
cheC; Chemotaxis protein CheY-P phosphatase CheC (EC:3.-.-.-)
Chemotaxis protein CheC {ECO:0000313|EMBL:CKH68058.1}; EC=3.-.-.- {ECO:0000313|EMBL:CKH68058.1};; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclost
Chemotaxis protein CheY-P phosphatase CheC n=6 Tax=Clostridium difficile RepID=Q188X8_CLOD6 rbh
NECEvent2014_2_3_scaffold_69_23
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27697..28182
DNA (486bp) protein (162aa)
Probable chemoreceptor glutamine deamidase CheD {ECO:0000256|HAMAP-Rule:MF_01440}; EC=3.5.1.44 {ECO:0000256|HAMAP-Rule:MF_01440};; TaxID=997827 species="Bacteria; Firmicutes; Clostridia; Clostridiales
Probable chemoreceptor glutamine deamidase CheD n=1 Tax=Clostridium difficile CD69 RepID=T3AFB3_CLODI rbh
chemotaxis protein
NECEvent2014_2_3_scaffold_69_24
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28225..28743
DNA (519bp) protein (173aa)
CheW-like domain protein n=48 Tax=Clostridium difficile RepID=T3IEQ6_CLODC rbh
cheW; Purine-binding chemotaxis protein CheW
Chemotaxis protein {ECO:0000313|EMBL:CKH67970.1}; Purine-binding chemotaxis protein CheW {ECO:0000313|EMBL:CEJ97068.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostrept
NECEvent2014_2_3_scaffold_69_25
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28879..29838
DNA (960bp) protein (320aa)
Diguanylate cyclase domain protein n=194 Tax=Clostridium difficile RepID=T3ID58_CLODC rbh
putative CheY-like chemosensory protein
Diguanylate cyclase domain protein {ECO:0000313|EMBL:EQG77763.1}; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostr
NECEvent2014_2_3_scaffold_69_26
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29864..31312
DNA (1449bp) protein (483aa)
Methyl-accepting chemotaxis (MCP) signaling domain protein n=2 Tax=Clostridium difficile RepID=T3J906_CLODI rbh
putative methyl-accepting chemotaxisreceptor,MCP family
Methyl-accepting chemotaxis (MCP) signaling domain protein {ECO:0000313|EMBL:EQG77946.1}; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridiu
NECEvent2014_2_3_scaffold_69_27
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31436..31567
DNA (132bp) protein (44aa)
Methyl-accepting chemotaxis (MCP) signaling domain protein n=1 Tax=Clostridium difficile DA00145 RepID=T3PIP3_CLODI
methyl accpeting chemotaxis protein
Methyl accpeting chemotaxis protein {ECO:0000313|EMBL:CKH67896.1}; Putative methyl-accepting chemotaxis receptor, MCP family {ECO:0000313|EMBL:CDT24853.1}; Putative methyl-accepting chemotaxis recepto
NECEvent2014_2_3_scaffold_69_28
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31750..33882
DNA (2133bp) protein (711aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclos
Chemotaxis protein CheA n=37 Tax=Clostridium difficile RepID=U3YSD8_CLODI rbh
cheA; chemotaxis protein
NECEvent2014_2_3_scaffold_69_29
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33895..34335
DNA (441bp) protein (147aa)
CheW-like domain protein n=182 Tax=Clostridium difficile RepID=C9XKI1_CLODC
chemotaxis protein
CheW-like domain protein {ECO:0000313|EMBL:EQG77706.1}; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium diff
NECEvent2014_2_3_scaffold_69_30
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

34371..35174
DNA (804bp) protein (268aa)
cheR; Methyl-accepting chemotaxis proteinsmethyltransferase, MCP family (EC:2.1.1.80)
Chemotaxis protein methyltransferase {ECO:0000313|EMBL:CDS83787.1}; EC=2.1.1.80 {ECO:0000313|EMBL:CDS83787.1};; Methyl-accepting chemotaxis proteins methyltransferase, MCP family {ECO:0000313|EMBL:CDT
Methyltransferase domain protein n=124 Tax=Clostridium difficile RepID=T3IER0_CLODC rbh
Displaying items 1-30 of 51 in total

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