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NECEvent2014_2_3_scaffold_148

Alias: 172_003_scaffold_148

Search features with annotation key words

Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_2_3_scaffold_148_1
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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101..1660
DNA (1560bp) protein (520aa)
Bacterial extracellular solute-binding s, 5 Middle family protein n=113 Tax=Clostridium difficile RepID=T3GC75_CLODC rbh
Bacterial extracellular solute-binding s, 5 Middle family protein {ECO:0000313|EMBL:EQI79763.1}; TaxID=1151391 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclo
appA; ABC-type transport system, oligopeptide-familysolute-binding protein
NECEvent2014_2_3_scaffold_148_2
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1766..2725
DNA (960bp) protein (320aa)
Binding--dependent transport system inner membrane component family protein n=124 Tax=Clostridium difficile RepID=C9XN43_CLODC rbh
oligopeptide ABC transporter permease
ABC-type transport system, oligopeptide-family permease protein {ECO:0000313|EMBL:CDS84968.1}; ABC-type transport system, oligopeptide-familypermease protein {ECO:0000313|EMBL:CEJ99296.1}; Oligopeptid
NECEvent2014_2_3_scaffold_148_3
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2728..3540
DNA (813bp) protein (271aa)
Binding--dependent transport system inner membrane component family protein n=61 Tax=Clostridium difficile RepID=T3GFN6_CLODC rbh
ABC-type transport system, oligopeptide-family permease protein {ECO:0000313|EMBL:CCL23030.1}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclost
appC; ABC-type transport system, oligopeptide-familypermease protein
NECEvent2014_2_3_scaffold_148_4
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3756..4658)
DNA (903bp) protein (301aa)
LysR-family transcriptional regulator n=184 Tax=Clostridium difficile RepID=C9XN45_CLODC rbh
LysR family transcriptional regulator
Transcriptional regulator, LysR family {ECO:0000313|EMBL:CCL30912.1}; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptocl
NECEvent2014_2_3_scaffold_148_5
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5013..6191
DNA (1179bp) protein (393aa)
Acetoacetyl-CoA thiolase 2 {ECO:0000313|EMBL:CDT03846.1}; EC=2.3.1.9 {ECO:0000313|EMBL:CDT03846.1};; Acetyl-CoA acetyltransferase {ECO:0000313|EMBL:CDS88678.1}; EC=2.3.1.9 {ECO:0000313|EMBL:CDS88678.1
Acetyl-CoA acetyltransferase n=4 Tax=Clostridium difficile RepID=T2TWE1_CLODI rbh
thlA2; acetyl-CoA acetyltransferase
NECEvent2014_2_3_scaffold_148_6
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6200..6856
DNA (657bp) protein (219aa)
Butyrate--acetoacetate CoA-transferase subunit A n=127 Tax=Clostridium difficile RepID=C9XN47_CLODC rbh
ctfA; butyrate--acetoacetate CoA-transferase subunit A
Butyrate--acetoacetate CoA-transferase subunit A {ECO:0000313|EMBL:CBE05986.1}; TaxID=645463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source
NECEvent2014_2_3_scaffold_148_7
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6856..7521
DNA (666bp) protein (222aa)
scoB; succinyl CoA:3-oxoacid CoA-transferase subunit B (EC:2.8.3.5)
Butyrate--acetoacetate CoA-transferase subunit B {ECO:0000313|EMBL:EQE60604.1}; EC=2.8.3.9 {ECO:0000313|EMBL:EQE60604.1};; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pepto
Succinyl CoA:3-oxoacid CoA-transferase subunit B n=182 Tax=Clostridium difficile RepID=Q183B1_CLOD6 rbh
NECEvent2014_2_3_scaffold_148_8
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7626..8402
DNA (777bp) protein (259aa)
3-hydroxybutyrate dehydrogenase (EC:1.1.1.30)
3-hydroxybutyrate dehydrogenase {ECO:0000313|EMBL:CDT03801.1}; EC=1.1.1.30 {ECO:0000313|EMBL:CDT03801.1};; Putative dehydrogenase {ECO:0000313|EMBL:CDS88685.1}; EC=1.1.1.- {ECO:0000313|EMBL:CDS88685.1
3-hydroxybutyrate dehydrogenase family protein n=4 Tax=Clostridium difficile RepID=T2TYS8_CLODI rbh
NECEvent2014_2_3_scaffold_148_9
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8464..9798
DNA (1335bp) protein (445aa)
Citrate transporter n=168 Tax=Clostridium difficile RepID=G6C004_CLODI rbh
putative permease
Putative permease {ECO:0000313|EMBL:CCL23036.1}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T
NECEvent2014_2_3_scaffold_148_10
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10293..11219
DNA (927bp) protein (309aa)
Uncharacterized protein n=2 Tax=Clostridium difficile RepID=T4PHK5_CLODI rbh
Uncharacterized protein {ECO:0000313|EMBL:EQG76755.1}; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium diffi
Calcium-chelating exported protein
NECEvent2014_2_3_scaffold_148_11
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11611..15150)
DNA (3540bp) protein (1180aa)
Pyruvate-flavodoxin oxidoreductase {ECO:0000256|PIRNR:PIRNR000159}; EC=1.2.7.- {ECO:0000256|PIRNR:PIRNR000159};; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococ
Pyruvate-flavodoxin oxidoreductase n=129 Tax=Clostridium difficile RepID=T2TE27_CLODI rbh
pyruvate-flavodoxin oxidoreductase
NECEvent2014_2_3_scaffold_148_12
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15668..16237)
DNA (570bp) protein (190aa)
Phosphate propanoyltransferase {ECO:0000256|PIRNR:PIRNR010130}; EC=2.3.1.222 {ECO:0000256|PIRNR:PIRNR010130};; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococca
Phosphate propanoyltransferase n=207 Tax=Clostridium difficile RepID=C9XN53_CLODC rbh
propanediol utilization protein
NECEvent2014_2_3_scaffold_148_13
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16309..16917)
DNA (609bp) protein (203aa)
Flavin reductase n=165 Tax=Clostridium difficile RepID=G6C008_CLODI rbh
putative flavodoxin-related protein
Putative flavodoxin-related protein {ECO:0000313|EMBL:CCL23043.1}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclost
NECEvent2014_2_3_scaffold_148_14
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16925..18688)
DNA (1764bp) protein (588aa)
Stage II sporulation E family protein n=97 Tax=Clostridium difficile RepID=T3GBX3_CLODC rbh
Stage II sporulation E family protein {ECO:0000313|EMBL:EQI79736.1}; TaxID=1151391 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclo
putative sporulation stage II, protein E
NECEvent2014_2_3_scaffold_148_15
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18731..19192)
DNA (462bp) protein (154aa)
Uncharacterized protein n=188 Tax=Clostridium difficile RepID=T3GAT0_CLODC
putative membrane protein
Uncharacterized protein {ECO:0000313|EMBL:EQE60569.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium diffi
NECEvent2014_2_3_scaffold_148_16
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19381..19842
DNA (462bp) protein (154aa)
Uncharacterized protein n=144 Tax=Clostridium difficile RepID=Q183B9_CLOD6 rbh
conserved hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAJ69573.1}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium diffic
NECEvent2014_2_3_scaffold_148_17
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19935..20105)
DNA (171bp) protein (57aa)
Uncharacterized protein n=214 Tax=Clostridium difficile RepID=F3Y5V5_CLOD6
uncharacterised protein
Uncharacterized protein {ECO:0000313|EMBL:CCK95206.1}; TaxID=1225722 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium diffi
NECEvent2014_2_3_scaffold_148_18
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20294..20515)
DNA (222bp) protein (74aa)
Small acid-soluble spore protein A n=215 Tax=Clostridium difficile RepID=C9XN58_CLODC
sspA; small acid-soluble spore protein A
Small, acid-soluble spore protein alpha {ECO:0000313|EMBL:EQF23814.1}; TaxID=1151292 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoc
NECEvent2014_2_3_scaffold_148_19
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20599..21825)
DNA (1227bp) protein (409aa)
Flavo, HI0933 family protein n=50 Tax=Clostridium difficile RepID=T3GDH4_CLODC rbh
lipoprotein
Lipoprotein {ECO:0000313|EMBL:CKH41554.1}; Putative lipoprotein {ECO:0000313|EMBL:CEJ99314.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostrid
NECEvent2014_2_3_scaffold_148_20
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21887..22819)
DNA (933bp) protein (311aa)
PAP2 superfamily protein n=29 Tax=Clostridium difficile RepID=T3GBW8_CLODC rbh
Putative membrane-associated phosphatase {ECO:0000313|EMBL:CCL23050.1}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Pepto
putative membrane-associated phosphatase
NECEvent2014_2_3_scaffold_148_21
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22908..23435)
DNA (528bp) protein (176aa)
Hypoxanthine phosphoribosyltransferase {ECO:0000313|EMBL:CCK88072.1}; EC=2.4.2.8 {ECO:0000313|EMBL:CCK88072.1};; TaxID=1215059 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococ
Hypoxanthine phosphoribosyltransferase n=216 Tax=Clostridium difficile RepID=Q183C4_CLOD6 rbh
hpt; phosphoribosyltransferase
NECEvent2014_2_3_scaffold_148_22
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23664..24740
DNA (1077bp) protein (359aa)
Aminotransferase class I and II family protein n=7 Tax=Clostridium difficile RepID=T2TW78_CLODI rbh
aminotransferase
Putative histidinol-phosphate transaminase {ECO:0000313|EMBL:EHJ32843.1}; TaxID=997827 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Pept
NECEvent2014_2_3_scaffold_148_23
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24826..26034)
DNA (1209bp) protein (403aa)
Transporter, dicarboxylate/amino acid:cation Na+/H+ symporter family protein n=199 Tax=Clostridium difficile RepID=G6B545_CLODI rbh
sodium:dicarboxylate symporter
Dicarboxylate symporter family protein {ECO:0000313|EMBL:EQE60470.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptocl
NECEvent2014_2_3_scaffold_148_24
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26195..26584)
DNA (390bp) protein (130aa)
Uncharacterized protein n=156 Tax=Clostridium difficile RepID=G6C019_CLODI
Uncharacterized protein {ECO:0000313|EMBL:CCL23054.1}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium diffi
hypothetical protein
NECEvent2014_2_3_scaffold_148_25
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26688..27689)
DNA (1002bp) protein (334aa)
asparagine synthetase AsnA (EC:6.3.1.1)
Aspartate--ammonia ligase {ECO:0000256|HAMAP-Rule:MF_00555, ECO:0000256|SAAS:SAAS00088413}; EC=6.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00555, ECO:0000256|SAAS:SAAS00088403};; Asparagine synthetase A {ECO:0
Aspartate--ammonia ligase n=206 Tax=Clostridium difficile RepID=C9XN65_CLODC rbh
NECEvent2014_2_3_scaffold_148_26
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28137..29327)
DNA (1191bp) protein (397aa)
Aminotransferase {ECO:0000313|EMBL:CKH41807.1}; EC=4.4.1.8 {ECO:0000313|EMBL:CKH41807.1};; Cystathionine beta-lyase PatB {ECO:0000313|EMBL:CDS88836.1}; EC=4.4.1.8 {ECO:0000313|EMBL:CDS88836.1};; Putat
C-S lyase family protein n=131 Tax=Clostridium difficile RepID=T3GFB3_CLODC rbh
putative pyridoxal phosphate-dependenttransferase
NECEvent2014_2_3_scaffold_148_27
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29608..30729)
DNA (1122bp) protein (374aa)
Amidohydrolase family protein n=19 Tax=Clostridium difficile RepID=T2TW84_CLODI rbh
Amidohydrolase family protein {ECO:0000313|EMBL:EQE60465.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium
amidohydrolase
NECEvent2014_2_3_scaffold_148_28
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30790..31275)
DNA (486bp) protein (162aa)
Transporter gate domain protein n=198 Tax=Clostridium difficile RepID=G6C023_CLODI rbh
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:CCL30966.1}; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium dif
NECEvent2014_2_3_scaffold_148_29
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31277..31945)
DNA (669bp) protein (223aa)
Transporter gate domain protein n=175 Tax=Clostridium difficile RepID=G6C024_CLODI rbh
putative membrane protein
Nucleoside recognition family protein {ECO:0000313|EMBL:EQG76317.1}; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclo
NECEvent2014_2_3_scaffold_148_30
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32335..34359
DNA (2025bp) protein (675aa)
AAA domain family protein n=5 Tax=Clostridium difficile RepID=T3GFU1_CLODC rbh
Transcriptional regulator, sigma-54 dependent {ECO:0000313|EMBL:CAJ69586.1}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="P
Transcriptional regulator, sigma-54 dependent
Displaying 30 items

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