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NECEvent2014_2_3_scaffold_194

Alias: 172_003_scaffold_194

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_2_3_scaffold_194_1
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(35..565)
DNA (531bp) protein (177aa)
Flavodoxin n=2 Tax=Clostridium difficile RepID=G6BV77_CLODI rbh
floX; flavodoxin
Flavodoxin {ECO:0000313|EMBL:EHJ31165.1}; TaxID=997827 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 002-P50-2
NECEvent2014_2_3_scaffold_194_2
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(659..1669)
DNA (1011bp) protein (337aa)
Uncharacterized protein n=182 Tax=Clostridium difficile RepID=T3I9X2_CLODC rbh
conserved hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EQE68623.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium diffi
NECEvent2014_2_3_scaffold_194_3
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2157..2501
DNA (345bp) protein (115aa)
Uncharacterized protein n=208 Tax=Clostridium difficile RepID=C9XM38_CLODC
hypothetical protein
Uncharacterised protein {ECO:0000313|EMBL:CEJ97354.1}; Uncharacterized protein {ECO:0000313|EMBL:CDS84695.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae
NECEvent2014_2_3_scaffold_194_4
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2833..4209)
DNA (1377bp) protein (459aa)
Sensory box protein n=158 Tax=Clostridium difficile RepID=T3I710_CLODC rbh
Transcriptional regulator, sigma-54-dependent
Sensory box protein {ECO:0000313|EMBL:EQE68650.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile
NECEvent2014_2_3_scaffold_194_5
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4308..5327)
DNA (1020bp) protein (340aa)
Electron transfer flavoFAD-binding domain protein n=183 Tax=Clostridium difficile RepID=T3IA84_CLODC rbh
etfA; electron transfer flavoprotein subunit alpha
Electron transfer flavoprotein FAD-binding domain protein {ECO:0000313|EMBL:EHJ31439.1}; TaxID=997828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.
NECEvent2014_2_3_scaffold_194_6
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5341..6135)
DNA (795bp) protein (265aa)
Electron transfer flavodomain protein n=198 Tax=Clostridium difficile RepID=T3I948_CLODC rbh
etfB; electron transfer flavoprotein subunit beta
Electron transfer flavoprotein beta-subunit,core {ECO:0000313|EMBL:CCL20921.1}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" sourc
NECEvent2014_2_3_scaffold_194_7
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6146..7288)
DNA (1143bp) protein (381aa)
putative acyl-CoA dehydrogenase (EC:1.3.99.-)
Acyl-CoA dehydrogenase, N-terminal domain protein n=186 Tax=Clostridium difficile RepID=T3I458_CLODC rbh
Acyl-CoA dehydrogenase, N-terminal domain protein {ECO:0000313|EMBL:EQE68599.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" sour
NECEvent2014_2_3_scaffold_194_8
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7328..8560)
DNA (1233bp) protein (411aa)
CoA-transferase III family protein n=84 Tax=Clostridium difficile RepID=C9XM33_CLODC rbh
CoA-transferase
Putative CoA-transferase, family III {ECO:0000313|EMBL:CEJ97349.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostri
NECEvent2014_2_3_scaffold_194_9
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8697..10037)
DNA (1341bp) protein (447aa)
Citrate transporter family protein n=190 Tax=Clostridium difficile RepID=C9XM32_CLODC rbh
permease
Citrate transporter family protein {ECO:0000313|EMBL:EQG78381.1}; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostr
NECEvent2014_2_3_scaffold_194_10
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10132..10947)
DNA (816bp) protein (272aa)
3-hydroxybutyryl-CoA dehydratase (Crotonase) n=96 Tax=Clostridium difficile RepID=C9XM31_CLODC rbh
crt1; 3-hydroxybutyryl-CoA dehydratase
3-hydroxybutyryl-CoA dehydratase {ECO:0000313|EMBL:EHJ31444.1}; TaxID=997828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridi
NECEvent2014_2_3_scaffold_194_11
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11555..12748)
DNA (1194bp) protein (398aa)
CoA-transferase III family protein n=141 Tax=Clostridium difficile RepID=T3I943_CLODC rbh
beta-alanine CoA-transferase
Putative beta-alanine CoA-transferase, family III {ECO:0000313|EMBL:CCL20916.1}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" sour
NECEvent2014_2_3_scaffold_194_12
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12824..14179)
DNA (1356bp) protein (452aa)
Citrate transporter family protein n=4 Tax=Clostridium difficile RepID=T4AZC8_CLODI rbh
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:CBE02734.1}; TaxID=645463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium diff
NECEvent2014_2_3_scaffold_194_13
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14224..15120)
DNA (897bp) protein (299aa)
Hydroxymethylglutaryl-CoA lyase yngG {ECO:0000313|EMBL:EQG78305.1}; EC=4.1.3.4 {ECO:0000313|EMBL:EQG78305.1};; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococca
Hydroxymethylglutaryl-CoA lyase yngG n=87 Tax=Clostridium difficile RepID=T3I585_CLODC rbh
putative pyruvate carboxyltransferase
NECEvent2014_2_3_scaffold_194_14
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15386..16390
DNA (1005bp) protein (335aa)
LacI-family transcriptional regulator n=183 Tax=Clostridium difficile RepID=C9XM27_CLODC rbh
LacI family transcriptional regulator
LacI family transcriptional regulator {ECO:0000313|EMBL:CKH58356.1}; Transcriptional regulator, LacI family {ECO:0000313|EMBL:CDS84231.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostri
NECEvent2014_2_3_scaffold_194_15
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16557..17276)
DNA (720bp) protein (240aa)
Probable transcriptional regulatory protein CD630_07950 n=207 Tax=Clostridium difficile RepID=Y795_CLOD6 rbh
hypothetical protein
Probable transcriptional regulatory protein QCK_0847 {ECO:0000256|HAMAP-Rule:MF_00693}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.
NECEvent2014_2_3_scaffold_194_16
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17359..18114)
DNA (756bp) protein (252aa)
nadE; NH3-dependent NAD(+) synthetase (EC:6.3.1.5)
NH(3)-dependent NAD(+) synthetase {ECO:0000256|HAMAP-Rule:MF_00193, ECO:0000256|RuleBase:RU003812}; EC=6.3.1.5 {ECO:0000256|HAMAP-Rule:MF_00193, ECO:0000256|RuleBase:RU003812};; TaxID=1151391 species=
NH(3)-dependent NAD(+) synthetase n=201 Tax=Clostridium difficile RepID=T3I927_CLODC rbh
NECEvent2014_2_3_scaffold_194_17
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18293..18679
DNA (387bp) protein (129aa)
Uncharacterized protein n=190 Tax=Clostridium difficile RepID=G6B738_CLODI
hypothetical protein
Sulfite exporter TauE/SafE family protein {ECO:0000313|EMBL:EQE68644.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Pept
NECEvent2014_2_3_scaffold_194_18
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18679..19056
DNA (378bp) protein (126aa)
Uncharacterized protein n=189 Tax=Clostridium difficile RepID=G6BV60_CLODI
hypothetical protein
Putative membrane protein, DUF81 family {ECO:0000313|EMBL:CDT44302.1}; Putative permease {ECO:0000313|EMBL:CKH58488.1}; Uncharacterized protein {ECO:0000313|EMBL:CDS84675.1}; TaxID=1496 species="Bacte
NECEvent2014_2_3_scaffold_194_19
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19142..19810)
DNA (669bp) protein (223aa)
Uncharacterized protein n=3 Tax=Clostridium difficile RepID=T3EGU2_CLODI rbh
YigZ family protein {ECO:0000313|EMBL:EHJ31449.1}; TaxID=997828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile
hypothetical protein
NECEvent2014_2_3_scaffold_194_20
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20091..20534)
DNA (444bp) protein (148aa)
NUDIX domain protein n=207 Tax=Clostridium difficile RepID=T3I485_CLODC rbh
putative hydrolase, NUDIX family
NUDIX domain protein {ECO:0000313|EMBL:EQF26564.1}; TaxID=1151292 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficil
NECEvent2014_2_3_scaffold_194_21
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20620..21297)
DNA (678bp) protein (226aa)
HEAT repeats family protein n=160 Tax=Clostridium difficile RepID=T3I5B8_CLODC rbh
conserved hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCL20906.1}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium diffi
NECEvent2014_2_3_scaffold_194_22
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21305..22588)
DNA (1284bp) protein (428aa)
GTPase HflX n=129 Tax=Clostridium difficile RepID=T3I730_CLODC rbh
putative GTP-binding protein, HflX type
GTPase HflX {ECO:0000256|HAMAP-Rule:MF_00900}; GTP-binding protein HflX {ECO:0000256|HAMAP-Rule:MF_00900}; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae
NECEvent2014_2_3_scaffold_194_23
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22805..23065
DNA (261bp) protein (87aa)
Cysteine-rich small domain protein n=137 Tax=Clostridium difficile RepID=T3IAA9_CLODC
metal-binding protein
Cysteine-rich small domain protein {ECO:0000313|EMBL:EQI88889.1}; TaxID=1151391 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostr
NECEvent2014_2_3_scaffold_194_24
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23207..23854)
DNA (648bp) protein (216aa)
Uncharacterized protein n=120 Tax=Clostridium difficile RepID=T3I970_CLODC rbh
putative membrane protein
Putative membrane protein {ECO:0000313|EMBL:CAJ67620.1}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium diff
NECEvent2014_2_3_scaffold_194_25
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23883..25463)
DNA (1581bp) protein (527aa)
ABC transporter, ATP-binding protein n=8 Tax=Clostridium difficile RepID=D5Q117_CLODI rbh
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EFH16685.1}; TaxID=525258 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclost
ABC transporter ATP-binding protein
NECEvent2014_2_3_scaffold_194_26
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25635..26519)
DNA (885bp) protein (295aa)
putative N-acetylmuramoyl-L-alanine amidase (EC:3.5.1.-)
Putative N-acetylmuramoyl-L-alanine amidase {ECO:0000313|EMBL:CAJ67618.1}; EC=3.5.1.- {ECO:0000313|EMBL:CAJ67618.1};; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostrept
N-acetylmuramoyl-L-alanine amidase family protein n=26 Tax=Clostridium difficile RepID=T3I5B4_CLODC rbh
NECEvent2014_2_3_scaffold_194_27
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26747..27754
DNA (1008bp) protein (336aa)
Stage IV sporulation protein SpoIVB, S55 peptidase family n=178 Tax=Clostridium difficile RepID=Q189X8_CLOD6 rbh
spoIVB2; Stage IV sporulation protein SpoIVB, S55peptidase family
SpoIVB peptidase S55 family protein {ECO:0000313|EMBL:EQE68653.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclost
Displaying 27 items

View Taxonomy