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NECEvent2014_2_3_scaffold_251

Alias: 172_003_scaffold_251

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_2_3_scaffold_251_1
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(160..768)
DNA (609bp) protein (203aa)
Putative 3-methyladenine DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00527, ECO:0000256|SAAS:SAAS00097343}; EC=3.2.2.- {ECO:0000256|HAMAP-Rule:MF_00527, ECO:0000256|SAAS:SAAS00097340};; TaxID=997827 sp
Putative 3-methyladenine DNA glycosylase n=212 Tax=Clostridium difficile RepID=3MGH_CLOD6 rbh
3-methyladenine DNA glycosylase
NECEvent2014_2_3_scaffold_251_2
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(877..3615)
DNA (2739bp) protein (913aa)
Two-component sensor histidinekinase,sporulation-associated spo0A (EC:2.7.13.3)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclost
Two-component sensor histidine kinase,sporulation-associated spo0A n=29 Tax=Clostridium difficile RepID=Q18C12_CLOD6 rbh
NECEvent2014_2_3_scaffold_251_3
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3763..4554)
DNA (792bp) protein (264aa)
Lipo, YaeC family protein n=181 Tax=Clostridium difficile RepID=C9XT42_CLODC rbh
D-methionine ABC transporter substrate-binding protein
Lipo, YaeC family protein {ECO:0000313|EMBL:EQE66510.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium dif
NECEvent2014_2_3_scaffold_251_4
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4590..5246)
DNA (657bp) protein (219aa)
Binding--dependent transport system inner membrane component family protein n=207 Tax=Clostridium difficile RepID=C9XT41_CLODC rbh
metI; D-methionine ABC transporter permease
ABC-type transport system, methionine-specific permease {ECO:0000313|EMBL:CDS86987.1}; ABC-type transport system, methionine-specificpermease {ECO:0000313|EMBL:CEJ98078.1}; D-methionine ABC transporte
NECEvent2014_2_3_scaffold_251_5
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5239..6204)
DNA (966bp) protein (322aa)
metN; ABC-type transport system, methionine-specificATP-binding protein (EC:3.6.3.-)
Methionine import ATP-binding protein MetN {ECO:0000256|HAMAP-Rule:MF_01719}; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01719};; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pep
Methionine import ATP-binding protein MetN n=126 Tax=Clostridium difficile RepID=METN_CLOD6 rbh
NECEvent2014_2_3_scaffold_251_6
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6706..7650)
DNA (945bp) protein (315aa)
DeoR-like helix-turn-helix domain protein n=71 Tax=Clostridium difficile RepID=T3HEQ7_CLODC rbh
DeoR family transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:CKH05089.1}; Transcriptional regulator, DeoR family {ECO:0000313|EMBL:CDT21765.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pept
NECEvent2014_2_3_scaffold_251_7
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7761..8228
DNA (468bp) protein (156aa)
Uncharacterized protein n=77 Tax=Clostridium difficile RepID=T3HHC9_CLODC rbh
conserved hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EQI00491.1}; TaxID=1151372 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium diffi
NECEvent2014_2_3_scaffold_251_8
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8398..8997)
DNA (600bp) protein (200aa)
Uncharacterized protein n=194 Tax=Clostridium difficile RepID=G6BQC4_CLODI rbh
putative lipoprotein
Putative lipoprotein {ECO:0000313|EMBL:EQE66513.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficil
NECEvent2014_2_3_scaffold_251_9
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9243..9839
DNA (597bp) protein (199aa)
Uncharacterized protein n=194 Tax=Clostridium difficile RepID=Q18C06_CLOD6 rbh
conserved hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EQE66531.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium diffi
NECEvent2014_2_3_scaffold_251_10
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9937..10929)
DNA (993bp) protein (331aa)
ABC transporter, substrate-binding , aliphatic sulfonates family protein n=196 Tax=Clostridium difficile RepID=T3HDC8_CLODC rbh
aliphatic sulfonate ABC transporter substrate-binding protein
ABC transporter, substrate-binding , aliphatic sulfonates family protein {ECO:0000313|EMBL:EQG76403.1}; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; P
NECEvent2014_2_3_scaffold_251_11
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10930..11661)
DNA (732bp) protein (244aa)
ABC-type transport system, sulfonates-family ATP-binding protein {ECO:0000313|EMBL:CCL21604.1}; EC=3.6.3.- {ECO:0000313|EMBL:CCL21604.1};; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clos
ABC transporter family protein n=158 Tax=Clostridium difficile RepID=C9XT20_CLODC rbh
aliphatic sulfonates ABC transporter ATP-binding protein
NECEvent2014_2_3_scaffold_251_12
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11654..12424)
DNA (771bp) protein (257aa)
Binding--dependent transport system inner membrane component family protein n=132 Tax=Clostridium difficile RepID=T3HHG5_CLODC rbh
ssuC; ABC-type transport system, sulfonates-familypermease
ABC-type transport system, sulfonates-family permease {ECO:0000313|EMBL:CCL21603.1}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;"
NECEvent2014_2_3_scaffold_251_13
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12509..13219)
DNA (711bp) protein (237aa)
Mitochondria biogenesis AIM24 family protein n=193 Tax=Clostridium difficile RepID=C9XT18_CLODC rbh
hypothetical protein
Putative tryptophan RNA-binding attenuation protein {ECO:0000313|EMBL:CCL29627.1}; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" so
NECEvent2014_2_3_scaffold_251_14
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13399..13551)
DNA (153bp) protein (51aa)
Uncharacterized protein n=202 Tax=Clostridium difficile RepID=Q18C01_CLOD6
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CEJ98068.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficil
NECEvent2014_2_3_scaffold_251_15
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13577..15733)
DNA (2157bp) protein (719aa)
Ferrous iron transport protein B n=25 Tax=Clostridium difficile RepID=T3HDC3_CLODC rbh
feoB1; Ferrous iron transport protein B
Ferrous iron transport protein B {ECO:0000313|EMBL:CEJ98067.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium
NECEvent2014_2_3_scaffold_251_16
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15833..16054)
DNA (222bp) protein (74aa)
FeoA domain protein n=216 Tax=Clostridium difficile RepID=C9XT15_CLODC
ferrous iron transport protein A
FeoA domain protein {ECO:0000313|EMBL:EQE66530.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile
NECEvent2014_2_3_scaffold_251_17
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16067..16279)
DNA (213bp) protein (71aa)
FeoA domain protein n=220 Tax=Clostridium difficile RepID=C9XT14_CLODC
ferrous iron transport protein
Ferrous iron transport protein {ECO:0000313|EMBL:CCL29623.1}; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridiu
NECEvent2014_2_3_scaffold_251_18
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16600..19497)
DNA (2898bp) protein (966aa)
Diguanylate cyclase domain protein n=26 Tax=Clostridium difficile RepID=T2U3L8_CLODI rbh
Putative signaling protein {ECO:0000313|EMBL:CAJ68341.1}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium dif
putative signaling protein
NECEvent2014_2_3_scaffold_251_19
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19824..20429)
DNA (606bp) protein (202aa)
Dienelactone hydrolase family protein n=3 Tax=Clostridium difficile RepID=T4AH06_CLODI rbh
Putative hydrolase {ECO:0000313|EMBL:CCL21596.1}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile
putative hydrolase
NECEvent2014_2_3_scaffold_251_20
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20692..20904)
DNA (213bp) protein (71aa)
Reverse rubrerythrin-1 {ECO:0000313|EMBL:EQI00478.1}; EC=1.11.1.1 {ECO:0000313|EMBL:EQI00478.1};; TaxID=1151372 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptocl
Reverse rubrerythrin-1 (Fragment) n=2 Tax=Clostridium difficile RepID=T3WJ02_CLODI
putative rubrerythrin (Rr)
Displaying 20 items

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