ggKbase home page

NECEvent2014_2_3_scaffold_365

Alias: 172_003_scaffold_365

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_2_3_scaffold_365_1
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(444..1118)
DNA (675bp) protein (225aa)
MgtC family protein n=183 Tax=Clostridium difficile RepID=C9XQI8_CLODC rbh
putative Mg2+ transporter-C (MgtC) family protein
Mg2+ transporter-C family protein {ECO:0000313|EMBL:EHJ28693.1}; TaxID=997827 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostrid
NECEvent2014_2_3_scaffold_365_2
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1338..1556)
DNA (219bp) protein (73aa)
Uncharacterized isochorismatase family protein yddQ {ECO:0000313|EMBL:CCL21540.1}; EC=3.-.-.- {ECO:0000313|EMBL:CCL21540.1};; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pe
Isochorismatase family protein n=94 Tax=Clostridium difficile RepID=T2UU08_CLODI
hypothetical protein
NECEvent2014_2_3_scaffold_365_3
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1568..1891)
DNA (324bp) protein (108aa)
Isochorismatase family protein n=3 Tax=Clostridium difficile RepID=T3HN79_CLODC
Isochorismatase {ECO:0000313|EMBL:CKH03425.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clost
hypothetical protein
NECEvent2014_2_3_scaffold_365_4
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1969..2334)
DNA (366bp) protein (122aa)
HxlR-like helix-turn-helix family protein n=163 Tax=Clostridium difficile RepID=C9XQJ0_CLODC
transcriptional regulator
Transcriptional regulator, HxlR family {ECO:0000313|EMBL:EHJ28695.1}; TaxID=997827 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclo
NECEvent2014_2_3_scaffold_365_5
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2565..2699
DNA (135bp) protein (45aa)
Uncharacterized protein n=215 Tax=Clostridium difficile RepID=C9XQJ1_CLODC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCL29505.1}; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium diffi
NECEvent2014_2_3_scaffold_365_6
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2799..3584
DNA (786bp) protein (262aa)
FR47-like family protein n=140 Tax=Clostridium difficile RepID=T3HLA6_CLODC rbh
acyl-CoA N-acyltransferase
FR47-like family protein {ECO:0000313|EMBL:EQE66609.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium diff
NECEvent2014_2_3_scaffold_365_7
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3681..4505)
DNA (825bp) protein (275aa)
Delta-lactam-biosynthetic de-N-acetylase {ECO:0000313|EMBL:EQE66622.1}; EC=3.5.-.- {ECO:0000313|EMBL:EQE66622.1};; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptoc
Delta-lactam-biosynthetic de-N-acetylase n=171 Tax=Clostridium difficile RepID=C9XQW6_CLODC rbh
exported polysaccharide deacetylase
NECEvent2014_2_3_scaffold_365_8
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4726..7845
DNA (3120bp) protein (1040aa)
DEAD/DEAH box helicase family protein n=28 Tax=Clostridium difficile RepID=T2U1U3_CLODI rbh
Putative helicase, DinG family {ECO:0000313|EMBL:CAJ68296.1}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium
putative helicase, DinG family
NECEvent2014_2_3_scaffold_365_9
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7854..8462
DNA (609bp) protein (203aa)
RNase H family protein n=11 Tax=Clostridium difficile PF1_CLODI">RepID=T2XPF1_CLODI rbh
ribonuclease
RNase H family protein {ECO:0000313|EMBL:EQI00646.1}; TaxID=1151372 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium diffic
NECEvent2014_2_3_scaffold_365_10
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8689..10818)
DNA (2130bp) protein (710aa)
Spore coat protein: peroxiredoxin/chitinase {ECO:0000313|EMBL:CEJ98021.1}; EC=1.11.1.15 {ECO:0000313|EMBL:CEJ98021.1};; EC=3.2.1.14 {ECO:0000313|EMBL:CEJ98021.1};; TaxID=1496 species="Bacteria; Firmic
AhpC/TSA family protein n=142 Tax=Clostridium difficile RepID=C9XQW9_CLODC rbh
bifunctional protein peroxiredoxin/chitinase
NECEvent2014_2_3_scaffold_365_11
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11084..11332
DNA (249bp) protein (83aa)
Uncharacterized protein n=154 Tax=Clostridium difficile RepID=Q18BV4_CLOD6
conserved hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CEJ98022.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficil
NECEvent2014_2_3_scaffold_365_12
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11498..12889
DNA (1392bp) protein (464aa)
UbiD family decarboxylase n=28 Tax=Clostridium difficile RepID=T3HGG2_CLODC rbh
conserved hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAJ68300.1}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium diffic
Displaying 12 items

View Taxonomy