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NECEvent2014_2_3_scaffold_129_2

Organism: NECEvent2014_2_3_Peptoclostridium_difficile_28_21

near complete RP 49 / 55 BSCG 51 / 51 ASCG 13 / 38 MC: 2
Location: 1608..2201

Top 3 Functional Annotations

Value Algorithm Source
Bacterial regulatory , Fis family protein n=180 Tax=Clostridium difficile RepID=C9XQX3_CLODC similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 197.0
  • Bit_score: 386
  • Evalue 1.60e-104
  • rbh
sigma-54-dependent transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 99.5
  • Coverage: 197.0
  • Bit_score: 385
  • Evalue 1.00e-104
Putative sigma-54-dependent transcriptional regulator {ECO:0000313|EMBL:CCL29516.1}; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.5
  • Coverage: 197.0
  • Bit_score: 385
  • Evalue 5.10e-104

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Taxonomy

Peptoclostridium difficile → Peptoclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 594
TTGAATTTAAATAATATAACGAATTACGTTCAAAGTATTTGCGAGAATATTTCTAATGTCTTGGATGTAGATGTTACTTTAGTTACAAAAGATTTAACTAGGATAGCAGGTACAGGAATATTCAGAGGTAAAATAGGAGAGACAATATCAGAGAAGTCAGTGTACTCTCTTGTTTTAAAAGATGGAAAATCCTATGTTATAAATAAAGAAATAGAAGAGAACTGTAATAAATGTGCAAATAGAGAAAATTGTAAAGAGTTAGCTGATATATGTACTCCCGTTAAAATGGGAGAGCATATACTTGGAATCTTGGGTATAGCTGCGTTTAATGAAGAACAAAAAGAAAAGATACTTTCAAAAGATAAGGAGTTAACTGCTTTTGTAAGGAGTATGTCTGATTTAATATCTTTTAAACTAGATGAACTTTATAAACAAGAAGTTAAGACTATAGATGACCTTGAGAGGGAAGCTATAGAAAATGCCATAAAGAAATATGGAAGTAATACAGAAGGTATGAAAAAAGTAGCTGAGGCATTAAATATAGGTATAGCTACACTCTATAGAAAAGTAAAAAAATTCAACATTAAAAGTTAA
PROTEIN sequence
Length: 198
LNLNNITNYVQSICENISNVLDVDVTLVTKDLTRIAGTGIFRGKIGETISEKSVYSLVLKDGKSYVINKEIEENCNKCANRENCKELADICTPVKMGEHILGILGIAAFNEEQKEKILSKDKELTAFVRSMSDLISFKLDELYKQEVKTIDDLEREAIENAIKKYGSNTEGMKKVAEALNIGIATLYRKVKKFNIKS*