ggKbase home page

NECEvent2014_2_3_scaffold_49_9

Organism: NECEvent2014_2_3_Peptoclostridium_difficile_28_21

near complete RP 49 / 55 BSCG 51 / 51 ASCG 13 / 38 MC: 2
Location: 8817..10808

Top 3 Functional Annotations

Value Algorithm Source
Sensory box protein n=116 Tax=Clostridium difficile RepID=T3GFU7_CLODC similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 663.0
  • Bit_score: 1295
  • Evalue 0.0
  • rbh
Transcriptional regulator, sigma-54-dependent {ECO:0000313|EMBL:CCL22712.1}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source=" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 663.0
  • Bit_score: 1294
  • Evalue 0.0
Transcriptional regulator, sigma-54-dependent similarity KEGG
DB: KEGG
  • Identity: 99.8
  • Coverage: 663.0
  • Bit_score: 1294
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Peptoclostridium difficile → Peptoclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1992
TTGCGAAAAAAAATAGGAATTATAGCCTCTGATATTGAATTAAAAGAAAGAATAGAAGAATTATATAGAGAAGATGTAGAAAATGGAACTATAATAATCGACATACTTAACCTAGACTTAATGGAAAATCAAGGTCGTATACTTGTTGAAAAAGGTGCCCAAGCTATAATTGGTAGAGGTGGAGGTTATAGTTTAGTAATAGATACAGTAAATGTACCTGTTATACCAATGAATATGAAGTCAACTGACCTTTTAAGAGCAATAGAAATAGCAAAGAAATATTCTAAAAAAGTAGTATTGATTCTTGGAGACAATGAAGTTTCTTTTGACTATGTTGGCTGGAGAAATGTCATAAGTACTGAAATAACTGAAGAATGGTTTGAATCTAAGTATGAGATAAGAAGTAAAGTTGTAAAATATATAGACCAAAAAGATGAAGTTGTAATCGTAGGAGGAGGTTTGGCATGTTCTTTTGCAAGGCAATATGGAATTGATAGTGTATTTGCAACTGCTAGTGATGAATCTATAAGAGAAGCTGTAGAATATTGTAAAAAATTATTAGATACATTAGGTGAAGAAAAGTTTAATAATGAAGTGTTACGAAATATACTTGATGGTATAAAAGATGGAGTAATTGCTATAGATAGTAATGGCAGTATAATTTTGTACAATGAAAGTGCAAAAAACATGCTTAAAGTAGAGAGAAAATGTGCACTTAATAAATACATCTTAGATGTATTTCCTAAAATGGAGTGGATGTTAGATTGTTTACATGAAAAAGAGGACGTAGAAGATAGAAAGATAAGAAATATAAATAATCTAATTGTTAATACTAGGACAACATTGATAAAAGTTGATAATAGTACTTATGGAGTTTTAGGAATAATACAAGATATAACCAAGTTACAAAACTTAGAAAGAAAAATAAGATTTGACTTGAATCAAAAAGGTCTCTATGCTAGATATACTTTTGATGATTTTTTATTTAAAGATAAATTAACTAAAGAATTTATTGAAGAAGCTAAAAAAATTGGAAAAAGTGATTATACAACTTTACTTTATGGAGAAAGTGGGTCTGGTAAAGAAATTATAGCTCATAGTATACACAATATAAGTAAAAGAAAAGATAGGCCTTTTGTTGCCATAAATTGTGCTACTATAGCAGAAAATTTACTTGAAAGTGAACTTTTTGGCTATGAAGAAGGTGCATTTACTGGTGCTAGAAAGGGTGGAAAAAGAGGGCTATTTGAACTTGCTCATGGAGGGACTCTTTTTTTAGATGAAATAAATAGTCTATCCTTTAATATTCAGACAAAACTATTAAGAGTAATAGAGGAACGTCAAATAATGAGAATTGGTTCTGATTATATAATACCTCTGGATATAAGGATTATAGCAGCAACGAACGAATCTTTAACCGAAAAAATAGTTATGGGTACATTTAGAGCAGACTTATTTTATAGATTGAGTAGTTTAGAGATAAATATACCTCCTTTAAGAGACAGAAGAGAAGATATAATACCTTTGTTTAACAATTTTGTAAATGAAGTATTAAAGGATGATGGTCTCAATGGAATAAACAGTATAGATGAAAATTTTGTTTTGACTAAAGATGAAATGGATAAGCTATATAATTATAGCTGGCCTGGAAATGTAAGAGAGTTAAAGACAATAGCTCAAAAATATGTTGTGACAGGTAAAATTAAATTGAGACAAGATAGAGATTTTAAAACTAAAAAATTACTTCCTAACTCTGAAGTAGACAAATTTAATTCTGAAACGACAGCAAGTGTAGAAGTCCAAGATGAATCTATAAATATAAGTAAGATAAATGATGGTAAGATAAGTATAGATATAAAAGAAGTAAATAAGTATGTTGAAGAAAAAATAATAAGTATGCTTTTTGCTCAGGGACTTTCTAAAAATGAAGTTGCACAAGTTCTTGGAATAAGCAGGACATCTTTATGGAAGAAATACAATAAAAATATTTAA
PROTEIN sequence
Length: 664
LRKKIGIIASDIELKERIEELYREDVENGTIIIDILNLDLMENQGRILVEKGAQAIIGRGGGYSLVIDTVNVPVIPMNMKSTDLLRAIEIAKKYSKKVVLILGDNEVSFDYVGWRNVISTEITEEWFESKYEIRSKVVKYIDQKDEVVIVGGGLACSFARQYGIDSVFATASDESIREAVEYCKKLLDTLGEEKFNNEVLRNILDGIKDGVIAIDSNGSIILYNESAKNMLKVERKCALNKYILDVFPKMEWMLDCLHEKEDVEDRKIRNINNLIVNTRTTLIKVDNSTYGVLGIIQDITKLQNLERKIRFDLNQKGLYARYTFDDFLFKDKLTKEFIEEAKKIGKSDYTTLLYGESGSGKEIIAHSIHNISKRKDRPFVAINCATIAENLLESELFGYEEGAFTGARKGGKRGLFELAHGGTLFLDEINSLSFNIQTKLLRVIEERQIMRIGSDYIIPLDIRIIAATNESLTEKIVMGTFRADLFYRLSSLEINIPPLRDRREDIIPLFNNFVNEVLKDDGLNGINSIDENFVLTKDEMDKLYNYSWPGNVRELKTIAQKYVVTGKIKLRQDRDFKTKKLLPNSEVDKFNSETTASVEVQDESINISKINDGKISIDIKEVNKYVEEKIISMLFAQGLSKNEVAQVLGISRTSLWKKYNKNI*